Gene : Eucgr.A01668 E. grandis v2.0
Defline:  (1 of 1) PTHR36738:SF1 - EXPRESSED PROTEIN Genomic Order:  1138
Name:  ? Eucgr.A01668 Secondary Identifier:  ? PAC:32048296
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01668 0.5kb upstream 0.5kb upstream 3021 true Chr01: 25678446-25681466 Eucalyptus grandis
Eucgr.A01668 0.5kb upstream 0.5kb upstream 500 false Chr01: 25678446-25678945 Eucalyptus grandis
Eucgr.A01668 0.5kb downstream 0.5kb downstream 3021 true Chr01: 25678946-25681966 Eucalyptus grandis
Eucgr.A01668 0.5kb downstream 0.5kb downstream 500 false Chr01: 25681467-25681966 Eucalyptus grandis
Eucgr.A01668 1.0kb upstream 1.0kb upstream 3521 true Chr01: 25677946-25681466 Eucalyptus grandis
Eucgr.A01668 1.0kb upstream 1.0kb upstream 1000 false Chr01: 25677946-25678945 Eucalyptus grandis
Eucgr.A01668 1.0kb downstream 1.0kb downstream 3521 true Chr01: 25678946-25682466 Eucalyptus grandis
Eucgr.A01668 1.0kb downstream 1.0kb downstream 1000 false Chr01: 25681467-25682466 Eucalyptus grandis
Eucgr.A01668 2.0kb upstream 2.0kb upstream 4521 true Chr01: 25676946-25681466 Eucalyptus grandis
Eucgr.A01668 2.0kb upstream 2.0kb upstream 2000 false Chr01: 25676946-25678945 Eucalyptus grandis
Eucgr.A01668 2.0kb downstream 2.0kb downstream 4521 true Chr01: 25678946-25683466 Eucalyptus grandis
Eucgr.A01668 2.0kb downstream 2.0kb downstream 2000 false Chr01: 25681467-25683466 Eucalyptus grandis
Eucgr.A01668 5.0kb upstream 5.0kb upstream 7521 true Chr01: 25673946-25681466 Eucalyptus grandis
Eucgr.A01668 5.0kb upstream 5.0kb upstream 5000 false Chr01: 25673946-25678945 Eucalyptus grandis
Eucgr.A01668 5.0kb downstream 5.0kb downstream 7521 true Chr01: 25678946-25686466 Eucalyptus grandis
Eucgr.A01668 5.0kb downstream 5.0kb downstream 5000 false Chr01: 25681467-25686466 Eucalyptus grandis
Eucgr.A01668 10.0kb upstream 10.0kb upstream 12521 true Chr01: 25668946-25681466 Eucalyptus grandis
Eucgr.A01668 10.0kb upstream 10.0kb upstream 10000 false Chr01: 25668946-25678945 Eucalyptus grandis
Eucgr.A01668 10.0kb downstream 10.0kb downstream 12521 true Chr01: 25678946-25691466 Eucalyptus grandis
Eucgr.A01668 10.0kb downstream 10.0kb downstream 10000 false Chr01: 25681467-25691466 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041422 5273 Angiosperm View MSA
124061850 5270 Rosid View MSA
123751922 5271 Pentapetalae View MSA
122793004 5272 Eudicot View MSA
121347775 5274 Embryophyte View MSA
123423846 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.4929 0.0 9.54699    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.29716 0.0 6.57159    
cufflinks 0.256333 0.0 0.965795 Low Low
cufflinks 1.68881 0.0 4.98207    
cufflinks 20.8751 0.0 47.9639   High

0 Strain