Gene : Eucgr.A01683 E. grandis v2.0
Defline:  (1 of 1) PTHR35514:SF1 - THYLAKOID LUMENAL 15.0 KDA PROTEIN 2, CHLOROPLASTIC Genomic Order:  1125
Name:  ? Eucgr.A01683 Secondary Identifier:  ? PAC:32048790
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01683 0.5kb upstream 0.5kb upstream 5191 true Chr01: 25401695-25406885 Eucalyptus grandis
Eucgr.A01683 0.5kb upstream 0.5kb upstream 500 false Chr01: 25401695-25402194 Eucalyptus grandis
Eucgr.A01683 0.5kb downstream 0.5kb downstream 5191 true Chr01: 25402195-25407385 Eucalyptus grandis
Eucgr.A01683 0.5kb downstream 0.5kb downstream 500 false Chr01: 25406886-25407385 Eucalyptus grandis
Eucgr.A01683 1.0kb upstream 1.0kb upstream 5691 true Chr01: 25401195-25406885 Eucalyptus grandis
Eucgr.A01683 1.0kb upstream 1.0kb upstream 1000 false Chr01: 25401195-25402194 Eucalyptus grandis
Eucgr.A01683 1.0kb downstream 1.0kb downstream 5691 true Chr01: 25402195-25407885 Eucalyptus grandis
Eucgr.A01683 1.0kb downstream 1.0kb downstream 1000 false Chr01: 25406886-25407885 Eucalyptus grandis
Eucgr.A01683 2.0kb upstream 2.0kb upstream 6691 true Chr01: 25400195-25406885 Eucalyptus grandis
Eucgr.A01683 2.0kb upstream 2.0kb upstream 2000 false Chr01: 25400195-25402194 Eucalyptus grandis
Eucgr.A01683 2.0kb downstream 2.0kb downstream 6691 true Chr01: 25402195-25408885 Eucalyptus grandis
Eucgr.A01683 2.0kb downstream 2.0kb downstream 2000 false Chr01: 25406886-25408885 Eucalyptus grandis
Eucgr.A01683 5.0kb upstream 5.0kb upstream 9691 true Chr01: 25397195-25406885 Eucalyptus grandis
Eucgr.A01683 5.0kb upstream 5.0kb upstream 5000 false Chr01: 25397195-25402194 Eucalyptus grandis
Eucgr.A01683 5.0kb downstream 5.0kb downstream 9691 true Chr01: 25402195-25411885 Eucalyptus grandis
Eucgr.A01683 5.0kb downstream 5.0kb downstream 5000 false Chr01: 25406886-25411885 Eucalyptus grandis
Eucgr.A01683 10.0kb upstream 10.0kb upstream 14691 true Chr01: 25392195-25406885 Eucalyptus grandis
Eucgr.A01683 10.0kb upstream 10.0kb upstream 10000 false Chr01: 25392195-25402194 Eucalyptus grandis
Eucgr.A01683 10.0kb downstream 10.0kb downstream 14691 true Chr01: 25402195-25416885 Eucalyptus grandis
Eucgr.A01683 10.0kb downstream 10.0kb downstream 10000 false Chr01: 25406886-25416885 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066253 5270 Rosid View MSA
123749452 5271 Pentapetalae View MSA
122788666 5272 Eudicot View MSA
122051168 5273 Angiosperm View MSA
121346154 5274 Embryophyte View MSA
123424497 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.15609 0.0 19.7465    
cufflinks 0.64661 0.0 2.48227 Low  
cufflinks 3.86413 0.0 12.6931    
cufflinks 0.392987 0.0 1.61736 Low Low
cufflinks 2.26527 0.0 6.88587    
cufflinks 20.427 0.0 53.8385   High

0 Strain