Gene : Eucgr.A01680 E. grandis v2.0
Defline:  (1 of 4) PTHR22814:SF113 - HEAVY-METAL-ASSOCIATED DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  1128
Name:  ? Eucgr.A01680 Secondary Identifier:  ? PAC:32047159
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01680 0.5kb upstream 0.5kb upstream 3227 true Chr01: 25510069-25513295 Eucalyptus grandis
Eucgr.A01680 0.5kb upstream 0.5kb upstream 500 false Chr01: 25512796-25513295 Eucalyptus grandis
Eucgr.A01680 0.5kb downstream 0.5kb downstream 3227 true Chr01: 25509569-25512795 Eucalyptus grandis
Eucgr.A01680 0.5kb downstream 0.5kb downstream 500 false Chr01: 25509569-25510068 Eucalyptus grandis
Eucgr.A01680 1.0kb upstream 1.0kb upstream 3727 true Chr01: 25510069-25513795 Eucalyptus grandis
Eucgr.A01680 1.0kb upstream 1.0kb upstream 1000 false Chr01: 25512796-25513795 Eucalyptus grandis
Eucgr.A01680 1.0kb downstream 1.0kb downstream 3727 true Chr01: 25509069-25512795 Eucalyptus grandis
Eucgr.A01680 1.0kb downstream 1.0kb downstream 1000 false Chr01: 25509069-25510068 Eucalyptus grandis
Eucgr.A01680 2.0kb upstream 2.0kb upstream 4727 true Chr01: 25510069-25514795 Eucalyptus grandis
Eucgr.A01680 2.0kb upstream 2.0kb upstream 2000 false Chr01: 25512796-25514795 Eucalyptus grandis
Eucgr.A01680 2.0kb downstream 2.0kb downstream 4727 true Chr01: 25508069-25512795 Eucalyptus grandis
Eucgr.A01680 2.0kb downstream 2.0kb downstream 2000 false Chr01: 25508069-25510068 Eucalyptus grandis
Eucgr.A01680 5.0kb upstream 5.0kb upstream 7727 true Chr01: 25510069-25517795 Eucalyptus grandis
Eucgr.A01680 5.0kb upstream 5.0kb upstream 5000 false Chr01: 25512796-25517795 Eucalyptus grandis
Eucgr.A01680 5.0kb downstream 5.0kb downstream 7727 true Chr01: 25505069-25512795 Eucalyptus grandis
Eucgr.A01680 5.0kb downstream 5.0kb downstream 5000 false Chr01: 25505069-25510068 Eucalyptus grandis
Eucgr.A01680 10.0kb upstream 10.0kb upstream 12727 true Chr01: 25510069-25522795 Eucalyptus grandis
Eucgr.A01680 10.0kb upstream 10.0kb upstream 10000 false Chr01: 25512796-25522795 Eucalyptus grandis
Eucgr.A01680 10.0kb downstream 10.0kb downstream 12727 true Chr01: 25500069-25512795 Eucalyptus grandis
Eucgr.A01680 10.0kb downstream 10.0kb downstream 10000 false Chr01: 25500069-25510068 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063094 5270 Rosid View MSA
123746961 5271 Pentapetalae View MSA
122796317 5272 Eudicot View MSA
122045466 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.86855 0.0 26.0081    
cufflinks 44.4431 0.0 109.006 High High
cufflinks 10.5097 0.0 25.6222    
cufflinks 31.3873 0.0 82.9586    
cufflinks 5.6639 0.0 13.2757   Low
cufflinks 14.7373 0.0 38.8259    

0 Strain