Gene : Eucgr.A01652 E. grandis v2.0
Defline:  (1 of 9) PTHR21576//PTHR21576:SF40 - UNCHARACTERIZED NODULIN-LIKE PROTEIN Genomic Order:  1150
Name:  ? Eucgr.A01652 Secondary Identifier:  ? PAC:32047409
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01652 0.5kb upstream 0.5kb upstream 2415 true Chr01: 25866628-25869042 Eucalyptus grandis
Eucgr.A01652 0.5kb upstream 0.5kb upstream 500 false Chr01: 25866628-25867127 Eucalyptus grandis
Eucgr.A01652 0.5kb downstream 0.5kb downstream 2415 true Chr01: 25867128-25869542 Eucalyptus grandis
Eucgr.A01652 0.5kb downstream 0.5kb downstream 500 false Chr01: 25869043-25869542 Eucalyptus grandis
Eucgr.A01652 1.0kb upstream 1.0kb upstream 2915 true Chr01: 25866128-25869042 Eucalyptus grandis
Eucgr.A01652 1.0kb upstream 1.0kb upstream 1000 false Chr01: 25866128-25867127 Eucalyptus grandis
Eucgr.A01652 1.0kb downstream 1.0kb downstream 2915 true Chr01: 25867128-25870042 Eucalyptus grandis
Eucgr.A01652 1.0kb downstream 1.0kb downstream 1000 false Chr01: 25869043-25870042 Eucalyptus grandis
Eucgr.A01652 2.0kb upstream 2.0kb upstream 3915 true Chr01: 25865128-25869042 Eucalyptus grandis
Eucgr.A01652 2.0kb upstream 2.0kb upstream 2000 false Chr01: 25865128-25867127 Eucalyptus grandis
Eucgr.A01652 2.0kb downstream 2.0kb downstream 3915 true Chr01: 25867128-25871042 Eucalyptus grandis
Eucgr.A01652 2.0kb downstream 2.0kb downstream 2000 false Chr01: 25869043-25871042 Eucalyptus grandis
Eucgr.A01652 5.0kb upstream 5.0kb upstream 6915 true Chr01: 25862128-25869042 Eucalyptus grandis
Eucgr.A01652 5.0kb upstream 5.0kb upstream 5000 false Chr01: 25862128-25867127 Eucalyptus grandis
Eucgr.A01652 5.0kb downstream 5.0kb downstream 6915 true Chr01: 25867128-25874042 Eucalyptus grandis
Eucgr.A01652 5.0kb downstream 5.0kb downstream 5000 false Chr01: 25869043-25874042 Eucalyptus grandis
Eucgr.A01652 10.0kb upstream 10.0kb upstream 11915 true Chr01: 25857128-25869042 Eucalyptus grandis
Eucgr.A01652 10.0kb upstream 10.0kb upstream 10000 false Chr01: 25857128-25867127 Eucalyptus grandis
Eucgr.A01652 10.0kb downstream 10.0kb downstream 11915 true Chr01: 25867128-25879042 Eucalyptus grandis
Eucgr.A01652 10.0kb downstream 10.0kb downstream 10000 false Chr01: 25869043-25879042 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070217 5270 Rosid View MSA
123751158 5271 Pentapetalae View MSA
122794287 5272 Eudicot View MSA
122046901 5273 Angiosperm View MSA
123429121 5275 Viridiplantae View MSA
121350674 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.38555 0.0 8.88177    
cufflinks 0.100543 0.0 0.435857 Low Low
cufflinks 2.46362 0.0 6.75135    
cufflinks 0.0679898 0.0 0.358778 Low Low
cufflinks 0.776378 0.0 2.40138    
cufflinks 3.19084 0.0 8.34542    

0 Strain