Gene : Eucgr.A01564 E. grandis v2.0
Defline:  (1 of 15) PF05003 - Protein of unknown function (DUF668) (DUF668) Genomic Order:  1223
Name:  ? Eucgr.A01564 Secondary Identifier:  ? PAC:32046225
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01564 0.5kb upstream 0.5kb upstream 3982 true Chr01: 27458187-27462168 Eucalyptus grandis
Eucgr.A01564 0.5kb upstream 0.5kb upstream 500 false Chr01: 27461669-27462168 Eucalyptus grandis
Eucgr.A01564 0.5kb downstream 0.5kb downstream 3982 true Chr01: 27457687-27461668 Eucalyptus grandis
Eucgr.A01564 0.5kb downstream 0.5kb downstream 500 false Chr01: 27457687-27458186 Eucalyptus grandis
Eucgr.A01564 1.0kb upstream 1.0kb upstream 4482 true Chr01: 27458187-27462668 Eucalyptus grandis
Eucgr.A01564 1.0kb upstream 1.0kb upstream 1000 false Chr01: 27461669-27462668 Eucalyptus grandis
Eucgr.A01564 1.0kb downstream 1.0kb downstream 4482 true Chr01: 27457187-27461668 Eucalyptus grandis
Eucgr.A01564 1.0kb downstream 1.0kb downstream 1000 false Chr01: 27457187-27458186 Eucalyptus grandis
Eucgr.A01564 2.0kb upstream 2.0kb upstream 5482 true Chr01: 27458187-27463668 Eucalyptus grandis
Eucgr.A01564 2.0kb upstream 2.0kb upstream 2000 false Chr01: 27461669-27463668 Eucalyptus grandis
Eucgr.A01564 2.0kb downstream 2.0kb downstream 5482 true Chr01: 27456187-27461668 Eucalyptus grandis
Eucgr.A01564 2.0kb downstream 2.0kb downstream 2000 false Chr01: 27456187-27458186 Eucalyptus grandis
Eucgr.A01564 5.0kb upstream 5.0kb upstream 8482 true Chr01: 27458187-27466668 Eucalyptus grandis
Eucgr.A01564 5.0kb upstream 5.0kb upstream 5000 false Chr01: 27461669-27466668 Eucalyptus grandis
Eucgr.A01564 5.0kb downstream 5.0kb downstream 8482 true Chr01: 27453187-27461668 Eucalyptus grandis
Eucgr.A01564 5.0kb downstream 5.0kb downstream 5000 false Chr01: 27453187-27458186 Eucalyptus grandis
Eucgr.A01564 10.0kb upstream 10.0kb upstream 13482 true Chr01: 27458187-27471668 Eucalyptus grandis
Eucgr.A01564 10.0kb upstream 10.0kb upstream 10000 false Chr01: 27461669-27471668 Eucalyptus grandis
Eucgr.A01564 10.0kb downstream 10.0kb downstream 13482 true Chr01: 27448187-27461668 Eucalyptus grandis
Eucgr.A01564 10.0kb downstream 10.0kb downstream 10000 false Chr01: 27448187-27458186 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070488 5270 Rosid View MSA
123744675 5271 Pentapetalae View MSA
122797750 5272 Eudicot View MSA
122049619 5273 Angiosperm View MSA
121344351 5274 Embryophyte View MSA
123380027 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.14318 0.0 11.0192    
cufflinks 2.90762 0.0 8.14155    
cufflinks 3.59027 0.0 9.41992    
cufflinks 1.12194 0.0 3.45075   Low
cufflinks 0.883721 0.0 2.8945   Low
cufflinks 2.74596 0.0 7.59618    

0 Strain