Gene : Eucgr.A01507 E. grandis v2.0
Defline:  (1 of 1) PTHR21236:SF8 - INTEGRAL MEMBRANE YIP1 FAMILY PROTEIN Genomic Order:  1278
Name:  ? Eucgr.A01507 Secondary Identifier:  ? PAC:32048999
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01507 0.5kb upstream 0.5kb upstream 1624 true Chr01: 28524295-28525918 Eucalyptus grandis
Eucgr.A01507 0.5kb upstream 0.5kb upstream 500 false Chr01: 28524295-28524794 Eucalyptus grandis
Eucgr.A01507 0.5kb downstream 0.5kb downstream 1624 true Chr01: 28524795-28526418 Eucalyptus grandis
Eucgr.A01507 0.5kb downstream 0.5kb downstream 500 false Chr01: 28525919-28526418 Eucalyptus grandis
Eucgr.A01507 1.0kb upstream 1.0kb upstream 2124 true Chr01: 28523795-28525918 Eucalyptus grandis
Eucgr.A01507 1.0kb upstream 1.0kb upstream 1000 false Chr01: 28523795-28524794 Eucalyptus grandis
Eucgr.A01507 1.0kb downstream 1.0kb downstream 2124 true Chr01: 28524795-28526918 Eucalyptus grandis
Eucgr.A01507 1.0kb downstream 1.0kb downstream 1000 false Chr01: 28525919-28526918 Eucalyptus grandis
Eucgr.A01507 2.0kb upstream 2.0kb upstream 3124 true Chr01: 28522795-28525918 Eucalyptus grandis
Eucgr.A01507 2.0kb upstream 2.0kb upstream 2000 false Chr01: 28522795-28524794 Eucalyptus grandis
Eucgr.A01507 2.0kb downstream 2.0kb downstream 3124 true Chr01: 28524795-28527918 Eucalyptus grandis
Eucgr.A01507 2.0kb downstream 2.0kb downstream 2000 false Chr01: 28525919-28527918 Eucalyptus grandis
Eucgr.A01507 5.0kb upstream 5.0kb upstream 6124 true Chr01: 28519795-28525918 Eucalyptus grandis
Eucgr.A01507 5.0kb upstream 5.0kb upstream 5000 false Chr01: 28519795-28524794 Eucalyptus grandis
Eucgr.A01507 5.0kb downstream 5.0kb downstream 6124 true Chr01: 28524795-28530918 Eucalyptus grandis
Eucgr.A01507 5.0kb downstream 5.0kb downstream 5000 false Chr01: 28525919-28530918 Eucalyptus grandis
Eucgr.A01507 10.0kb upstream 10.0kb upstream 11124 true Chr01: 28514795-28525918 Eucalyptus grandis
Eucgr.A01507 10.0kb upstream 10.0kb upstream 10000 false Chr01: 28514795-28524794 Eucalyptus grandis
Eucgr.A01507 10.0kb downstream 10.0kb downstream 11124 true Chr01: 28524795-28535918 Eucalyptus grandis
Eucgr.A01507 10.0kb downstream 10.0kb downstream 10000 false Chr01: 28525919-28535918 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071783 5270 Rosid View MSA
123751482 5271 Pentapetalae View MSA
122787116 5272 Eudicot View MSA
122046635 5273 Angiosperm View MSA
121346620 5274 Embryophyte View MSA
123427417 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.0942 0.0 52.7404    
cufflinks 39.8215 0.0 91.301    
cufflinks 15.6654 0.0 39.1806   Low
cufflinks 56.796 0.0 128.035 High High
cufflinks 18.711 0.0 45.7525    
cufflinks 20.5752 0.0 48.9887    

0 Strain