Gene : Eucgr.A01509 E. grandis v2.0
Defline:  (1 of 2) PTHR33601:SF7 - PROTEIN LITTLE ZIPPER 3 Genomic Order:  1276
Name:  ? Eucgr.A01509 Secondary Identifier:  ? PAC:32046995
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01509 0.5kb upstream 0.5kb upstream 1066 true Chr01: 28509205-28510270 Eucalyptus grandis
Eucgr.A01509 0.5kb upstream 0.5kb upstream 500 false Chr01: 28509205-28509704 Eucalyptus grandis
Eucgr.A01509 0.5kb downstream 0.5kb downstream 1066 true Chr01: 28509705-28510770 Eucalyptus grandis
Eucgr.A01509 0.5kb downstream 0.5kb downstream 500 false Chr01: 28510271-28510770 Eucalyptus grandis
Eucgr.A01509 1.0kb upstream 1.0kb upstream 1566 true Chr01: 28508705-28510270 Eucalyptus grandis
Eucgr.A01509 1.0kb upstream 1.0kb upstream 1000 false Chr01: 28508705-28509704 Eucalyptus grandis
Eucgr.A01509 1.0kb downstream 1.0kb downstream 1566 true Chr01: 28509705-28511270 Eucalyptus grandis
Eucgr.A01509 1.0kb downstream 1.0kb downstream 1000 false Chr01: 28510271-28511270 Eucalyptus grandis
Eucgr.A01509 2.0kb upstream 2.0kb upstream 2566 true Chr01: 28507705-28510270 Eucalyptus grandis
Eucgr.A01509 2.0kb upstream 2.0kb upstream 2000 false Chr01: 28507705-28509704 Eucalyptus grandis
Eucgr.A01509 2.0kb downstream 2.0kb downstream 2566 true Chr01: 28509705-28512270 Eucalyptus grandis
Eucgr.A01509 2.0kb downstream 2.0kb downstream 2000 false Chr01: 28510271-28512270 Eucalyptus grandis
Eucgr.A01509 5.0kb upstream 5.0kb upstream 5566 true Chr01: 28504705-28510270 Eucalyptus grandis
Eucgr.A01509 5.0kb upstream 5.0kb upstream 5000 false Chr01: 28504705-28509704 Eucalyptus grandis
Eucgr.A01509 5.0kb downstream 5.0kb downstream 5566 true Chr01: 28509705-28515270 Eucalyptus grandis
Eucgr.A01509 5.0kb downstream 5.0kb downstream 5000 false Chr01: 28510271-28515270 Eucalyptus grandis
Eucgr.A01509 10.0kb upstream 10.0kb upstream 10566 true Chr01: 28499705-28510270 Eucalyptus grandis
Eucgr.A01509 10.0kb upstream 10.0kb upstream 10000 false Chr01: 28499705-28509704 Eucalyptus grandis
Eucgr.A01509 10.0kb downstream 10.0kb downstream 10566 true Chr01: 28509705-28520270 Eucalyptus grandis
Eucgr.A01509 10.0kb downstream 10.0kb downstream 10000 false Chr01: 28510271-28520270 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071909 5270 Rosid View MSA
123751498 5271 Pentapetalae View MSA
122790850 5272 Eudicot View MSA
122046003 5273 Angiosperm View MSA
121310535 5274 Embryophyte View MSA
123347994 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.3866 0.0 7.70308    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.65751 0.0 5.66148    
cufflinks 5.48809 0.0 16.1021    
cufflinks 15.0748 0.0 39.7264   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain