Gene : Eucgr.A01417 E. grandis v2.0
Defline:  (1 of 1) PTHR32295:SF0 - PROTEIN IQ-DOMAIN 17-RELATED Genomic Order:  1359
Name:  ? Eucgr.A01417 Secondary Identifier:  ? PAC:32046103
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01417 0.5kb upstream 0.5kb upstream 2503 true Chr01: 29417924-29420426 Eucalyptus grandis
Eucgr.A01417 0.5kb upstream 0.5kb upstream 500 false Chr01: 29419927-29420426 Eucalyptus grandis
Eucgr.A01417 0.5kb downstream 0.5kb downstream 2503 true Chr01: 29417424-29419926 Eucalyptus grandis
Eucgr.A01417 0.5kb downstream 0.5kb downstream 500 false Chr01: 29417424-29417923 Eucalyptus grandis
Eucgr.A01417 1.0kb upstream 1.0kb upstream 3003 true Chr01: 29417924-29420926 Eucalyptus grandis
Eucgr.A01417 1.0kb upstream 1.0kb upstream 1000 false Chr01: 29419927-29420926 Eucalyptus grandis
Eucgr.A01417 1.0kb downstream 1.0kb downstream 3003 true Chr01: 29416924-29419926 Eucalyptus grandis
Eucgr.A01417 1.0kb downstream 1.0kb downstream 1000 false Chr01: 29416924-29417923 Eucalyptus grandis
Eucgr.A01417 2.0kb upstream 2.0kb upstream 4003 true Chr01: 29417924-29421926 Eucalyptus grandis
Eucgr.A01417 2.0kb upstream 2.0kb upstream 2000 false Chr01: 29419927-29421926 Eucalyptus grandis
Eucgr.A01417 2.0kb downstream 2.0kb downstream 4003 true Chr01: 29415924-29419926 Eucalyptus grandis
Eucgr.A01417 2.0kb downstream 2.0kb downstream 2000 false Chr01: 29415924-29417923 Eucalyptus grandis
Eucgr.A01417 5.0kb upstream 5.0kb upstream 7003 true Chr01: 29417924-29424926 Eucalyptus grandis
Eucgr.A01417 5.0kb upstream 5.0kb upstream 5000 false Chr01: 29419927-29424926 Eucalyptus grandis
Eucgr.A01417 5.0kb downstream 5.0kb downstream 7003 true Chr01: 29412924-29419926 Eucalyptus grandis
Eucgr.A01417 5.0kb downstream 5.0kb downstream 5000 false Chr01: 29412924-29417923 Eucalyptus grandis
Eucgr.A01417 10.0kb upstream 10.0kb upstream 12003 true Chr01: 29417924-29429926 Eucalyptus grandis
Eucgr.A01417 10.0kb upstream 10.0kb upstream 10000 false Chr01: 29419927-29429926 Eucalyptus grandis
Eucgr.A01417 10.0kb downstream 10.0kb downstream 12003 true Chr01: 29407924-29419926 Eucalyptus grandis
Eucgr.A01417 10.0kb downstream 10.0kb downstream 10000 false Chr01: 29407924-29417923 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124075393 5270 Rosid View MSA
123755796 5271 Pentapetalae View MSA
122777016 5272 Eudicot View MSA
122049529 5273 Angiosperm View MSA
121311456 5274 Embryophyte View MSA
123348751 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.178139 0.0 0.66611 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.29266 0.0 3.77633   High
cufflinks 0.180759 0.0 0.68105 Low  
cufflinks 0.767636 0.0 2.37434    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain