Gene : Eucgr.A01406 E. grandis v2.0
Defline:  (1 of 1) PTHR33231:SF1 - 30S RIBOSOMAL PROTEIN-RELATED Genomic Order:  1370
Name:  ? Eucgr.A01406 Secondary Identifier:  ? PAC:32045828
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01406 0.5kb upstream 0.5kb upstream 3438 true Chr01: 29502964-29506401 Eucalyptus grandis
Eucgr.A01406 0.5kb upstream 0.5kb upstream 500 false Chr01: 29505902-29506401 Eucalyptus grandis
Eucgr.A01406 0.5kb downstream 0.5kb downstream 3438 true Chr01: 29502464-29505901 Eucalyptus grandis
Eucgr.A01406 0.5kb downstream 0.5kb downstream 500 false Chr01: 29502464-29502963 Eucalyptus grandis
Eucgr.A01406 1.0kb upstream 1.0kb upstream 3938 true Chr01: 29502964-29506901 Eucalyptus grandis
Eucgr.A01406 1.0kb upstream 1.0kb upstream 1000 false Chr01: 29505902-29506901 Eucalyptus grandis
Eucgr.A01406 1.0kb downstream 1.0kb downstream 3938 true Chr01: 29501964-29505901 Eucalyptus grandis
Eucgr.A01406 1.0kb downstream 1.0kb downstream 1000 false Chr01: 29501964-29502963 Eucalyptus grandis
Eucgr.A01406 2.0kb upstream 2.0kb upstream 4938 true Chr01: 29502964-29507901 Eucalyptus grandis
Eucgr.A01406 2.0kb upstream 2.0kb upstream 2000 false Chr01: 29505902-29507901 Eucalyptus grandis
Eucgr.A01406 2.0kb downstream 2.0kb downstream 4938 true Chr01: 29500964-29505901 Eucalyptus grandis
Eucgr.A01406 2.0kb downstream 2.0kb downstream 2000 false Chr01: 29500964-29502963 Eucalyptus grandis
Eucgr.A01406 5.0kb upstream 5.0kb upstream 7938 true Chr01: 29502964-29510901 Eucalyptus grandis
Eucgr.A01406 5.0kb upstream 5.0kb upstream 5000 false Chr01: 29505902-29510901 Eucalyptus grandis
Eucgr.A01406 5.0kb downstream 5.0kb downstream 7938 true Chr01: 29497964-29505901 Eucalyptus grandis
Eucgr.A01406 5.0kb downstream 5.0kb downstream 5000 false Chr01: 29497964-29502963 Eucalyptus grandis
Eucgr.A01406 10.0kb upstream 10.0kb upstream 12938 true Chr01: 29502964-29515901 Eucalyptus grandis
Eucgr.A01406 10.0kb upstream 10.0kb upstream 10000 false Chr01: 29505902-29515901 Eucalyptus grandis
Eucgr.A01406 10.0kb downstream 10.0kb downstream 12938 true Chr01: 29492964-29505901 Eucalyptus grandis
Eucgr.A01406 10.0kb downstream 10.0kb downstream 10000 false Chr01: 29492964-29502963 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068833 5270 Rosid View MSA
123738015 5271 Pentapetalae View MSA
122786116 5272 Eudicot View MSA
122044034 5273 Angiosperm View MSA
121345807 5274 Embryophyte View MSA
123423894 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 58.8795 0.0 131.694 High  
cufflinks 6.74255 0.0 16.1579    
cufflinks 25.6592 0.0 56.8362    
cufflinks 2.03031 0.0 5.46779   Low
cufflinks 2.29482 0.0 6.11692    
cufflinks 216.532 0.0 536.99 High High

0 Strain