Gene : Eucgr.A01410 E. grandis v2.0
Defline:  (1 of 9) PF00428 - 60s Acidic ribosomal protein (Ribosomal_60s) Genomic Order:  1366
Name:  ? Eucgr.A01410 Secondary Identifier:  ? PAC:32048765
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01410 0.5kb upstream 0.5kb upstream 2081 true Chr01: 29471818-29473898 Eucalyptus grandis
Eucgr.A01410 0.5kb upstream 0.5kb upstream 500 false Chr01: 29471818-29472317 Eucalyptus grandis
Eucgr.A01410 0.5kb downstream 0.5kb downstream 2081 true Chr01: 29472318-29474398 Eucalyptus grandis
Eucgr.A01410 0.5kb downstream 0.5kb downstream 500 false Chr01: 29473899-29474398 Eucalyptus grandis
Eucgr.A01410 1.0kb upstream 1.0kb upstream 2581 true Chr01: 29471318-29473898 Eucalyptus grandis
Eucgr.A01410 1.0kb upstream 1.0kb upstream 1000 false Chr01: 29471318-29472317 Eucalyptus grandis
Eucgr.A01410 1.0kb downstream 1.0kb downstream 2581 true Chr01: 29472318-29474898 Eucalyptus grandis
Eucgr.A01410 1.0kb downstream 1.0kb downstream 1000 false Chr01: 29473899-29474898 Eucalyptus grandis
Eucgr.A01410 2.0kb upstream 2.0kb upstream 3581 true Chr01: 29470318-29473898 Eucalyptus grandis
Eucgr.A01410 2.0kb upstream 2.0kb upstream 2000 false Chr01: 29470318-29472317 Eucalyptus grandis
Eucgr.A01410 2.0kb downstream 2.0kb downstream 3581 true Chr01: 29472318-29475898 Eucalyptus grandis
Eucgr.A01410 2.0kb downstream 2.0kb downstream 2000 false Chr01: 29473899-29475898 Eucalyptus grandis
Eucgr.A01410 5.0kb upstream 5.0kb upstream 6581 true Chr01: 29467318-29473898 Eucalyptus grandis
Eucgr.A01410 5.0kb upstream 5.0kb upstream 5000 false Chr01: 29467318-29472317 Eucalyptus grandis
Eucgr.A01410 5.0kb downstream 5.0kb downstream 6581 true Chr01: 29472318-29478898 Eucalyptus grandis
Eucgr.A01410 5.0kb downstream 5.0kb downstream 5000 false Chr01: 29473899-29478898 Eucalyptus grandis
Eucgr.A01410 10.0kb upstream 10.0kb upstream 11581 true Chr01: 29462318-29473898 Eucalyptus grandis
Eucgr.A01410 10.0kb upstream 10.0kb upstream 10000 false Chr01: 29462318-29472317 Eucalyptus grandis
Eucgr.A01410 10.0kb downstream 10.0kb downstream 11581 true Chr01: 29472318-29483898 Eucalyptus grandis
Eucgr.A01410 10.0kb downstream 10.0kb downstream 10000 false Chr01: 29473899-29483898 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060612 5270 Rosid View MSA
123738498 5271 Pentapetalae View MSA
122786721 5272 Eudicot View MSA
122041994 5273 Angiosperm View MSA
121347271 5274 Embryophyte View MSA
123424793 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.72 0.0 38.2973    
cufflinks 14.045 0.0 34.8483    
cufflinks 16.1294 0.0 39.6824    
cufflinks 31.4839 0.0 72.5247    
cufflinks 59.0565 0.0 131.437 High High
cufflinks 23.783 0.0 55.7058    

0 Strain