Gene : Eucgr.A01371 E. grandis v2.0
Defline:  (1 of 3) PTHR31717:SF8 - ZINC FINGER PROTEIN CONSTANS-LIKE 10-RELATED Genomic Order:  457
Name:  ? Eucgr.A01371 Secondary Identifier:  ? PAC:32049093
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01371 0.5kb upstream 0.5kb upstream 9567 true Chr01: 9043952-9053518 Eucalyptus grandis
Eucgr.A01371 0.5kb upstream 0.5kb upstream 500 false Chr01: 9053019-9053518 Eucalyptus grandis
Eucgr.A01371 0.5kb downstream 0.5kb downstream 9567 true Chr01: 9043452-9053018 Eucalyptus grandis
Eucgr.A01371 0.5kb downstream 0.5kb downstream 500 false Chr01: 9043452-9043951 Eucalyptus grandis
Eucgr.A01371 1.0kb upstream 1.0kb upstream 10067 true Chr01: 9043952-9054018 Eucalyptus grandis
Eucgr.A01371 1.0kb upstream 1.0kb upstream 1000 false Chr01: 9053019-9054018 Eucalyptus grandis
Eucgr.A01371 1.0kb downstream 1.0kb downstream 10067 true Chr01: 9042952-9053018 Eucalyptus grandis
Eucgr.A01371 1.0kb downstream 1.0kb downstream 1000 false Chr01: 9042952-9043951 Eucalyptus grandis
Eucgr.A01371 2.0kb upstream 2.0kb upstream 11067 true Chr01: 9043952-9055018 Eucalyptus grandis
Eucgr.A01371 2.0kb upstream 2.0kb upstream 2000 false Chr01: 9053019-9055018 Eucalyptus grandis
Eucgr.A01371 2.0kb downstream 2.0kb downstream 11067 true Chr01: 9041952-9053018 Eucalyptus grandis
Eucgr.A01371 2.0kb downstream 2.0kb downstream 2000 false Chr01: 9041952-9043951 Eucalyptus grandis
Eucgr.A01371 5.0kb upstream 5.0kb upstream 14067 true Chr01: 9043952-9058018 Eucalyptus grandis
Eucgr.A01371 5.0kb upstream 5.0kb upstream 5000 false Chr01: 9053019-9058018 Eucalyptus grandis
Eucgr.A01371 5.0kb downstream 5.0kb downstream 14067 true Chr01: 9038952-9053018 Eucalyptus grandis
Eucgr.A01371 5.0kb downstream 5.0kb downstream 5000 false Chr01: 9038952-9043951 Eucalyptus grandis
Eucgr.A01371 10.0kb upstream 10.0kb upstream 19067 true Chr01: 9043952-9063018 Eucalyptus grandis
Eucgr.A01371 10.0kb upstream 10.0kb upstream 10000 false Chr01: 9053019-9063018 Eucalyptus grandis
Eucgr.A01371 10.0kb downstream 10.0kb downstream 19067 true Chr01: 9033952-9053018 Eucalyptus grandis
Eucgr.A01371 10.0kb downstream 10.0kb downstream 10000 false Chr01: 9033952-9043951 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060563 5270 Rosid View MSA
123751246 5271 Pentapetalae View MSA
122785793 5272 Eudicot View MSA
122049477 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350351 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.4877 0.0 30.4636    
cufflinks 12.5433 0.0 32.4921    
cufflinks 11.0404 0.0 27.4278    
cufflinks 17.1893 0.0 46.8668    
cufflinks 10.4788 0.0 26.7946    
cufflinks 27.9418 0.0 68.4849   High

0 Strain