Gene : Eucgr.A01301 E. grandis v2.0
Defline:  (1 of 1) PTHR22847:SF361 - JOUBERIN Genomic Order:  403
Name:  ? Eucgr.A01301 Secondary Identifier:  ? PAC:32048629
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01301 0.5kb upstream 0.5kb upstream 10106 true Chr01: 8060095-8070200 Eucalyptus grandis
Eucgr.A01301 0.5kb upstream 0.5kb upstream 500 false Chr01: 8069701-8070200 Eucalyptus grandis
Eucgr.A01301 0.5kb downstream 0.5kb downstream 10106 true Chr01: 8059595-8069700 Eucalyptus grandis
Eucgr.A01301 0.5kb downstream 0.5kb downstream 500 false Chr01: 8059595-8060094 Eucalyptus grandis
Eucgr.A01301 1.0kb upstream 1.0kb upstream 10606 true Chr01: 8060095-8070700 Eucalyptus grandis
Eucgr.A01301 1.0kb upstream 1.0kb upstream 1000 false Chr01: 8069701-8070700 Eucalyptus grandis
Eucgr.A01301 1.0kb downstream 1.0kb downstream 10606 true Chr01: 8059095-8069700 Eucalyptus grandis
Eucgr.A01301 1.0kb downstream 1.0kb downstream 1000 false Chr01: 8059095-8060094 Eucalyptus grandis
Eucgr.A01301 2.0kb upstream 2.0kb upstream 11606 true Chr01: 8060095-8071700 Eucalyptus grandis
Eucgr.A01301 2.0kb upstream 2.0kb upstream 2000 false Chr01: 8069701-8071700 Eucalyptus grandis
Eucgr.A01301 2.0kb downstream 2.0kb downstream 11606 true Chr01: 8058095-8069700 Eucalyptus grandis
Eucgr.A01301 2.0kb downstream 2.0kb downstream 2000 false Chr01: 8058095-8060094 Eucalyptus grandis
Eucgr.A01301 5.0kb upstream 5.0kb upstream 14606 true Chr01: 8060095-8074700 Eucalyptus grandis
Eucgr.A01301 5.0kb upstream 5.0kb upstream 5000 false Chr01: 8069701-8074700 Eucalyptus grandis
Eucgr.A01301 5.0kb downstream 5.0kb downstream 14606 true Chr01: 8055095-8069700 Eucalyptus grandis
Eucgr.A01301 5.0kb downstream 5.0kb downstream 5000 false Chr01: 8055095-8060094 Eucalyptus grandis
Eucgr.A01301 10.0kb upstream 10.0kb upstream 19606 true Chr01: 8060095-8079700 Eucalyptus grandis
Eucgr.A01301 10.0kb upstream 10.0kb upstream 10000 false Chr01: 8069701-8079700 Eucalyptus grandis
Eucgr.A01301 10.0kb downstream 10.0kb downstream 19606 true Chr01: 8050095-8069700 Eucalyptus grandis
Eucgr.A01301 10.0kb downstream 10.0kb downstream 10000 false Chr01: 8050095-8060094 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066327 5270 Rosid View MSA
123736466 5271 Pentapetalae View MSA
122792300 5272 Eudicot View MSA
122048492 5273 Angiosperm View MSA
121346834 5274 Embryophyte View MSA
123423807 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.3741 0.0 14.7495   High
cufflinks 1.74753 0.0 4.54959   Low
cufflinks 4.38682 0.0 10.4433    
cufflinks 2.1882 0.0 5.55912    
cufflinks 2.27846 0.0 5.79081    
cufflinks 3.65553 0.0 8.93306    

0 Strain