Gene : Eucgr.A01318 E. grandis v2.0
Defline:  (1 of 1) PTHR11062:SF56 - XYLOGLUCAN GALACTOSYLTRANSFERASE KATAMARI1 Genomic Order:  412
Name:  ? Eucgr.A01318 Secondary Identifier:  ? PAC:32047957
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01318 0.5kb upstream 0.5kb upstream 2847 true Chr01: 8189444-8192290 Eucalyptus grandis
Eucgr.A01318 0.5kb upstream 0.5kb upstream 500 false Chr01: 8189444-8189943 Eucalyptus grandis
Eucgr.A01318 0.5kb downstream 0.5kb downstream 2847 true Chr01: 8189944-8192790 Eucalyptus grandis
Eucgr.A01318 0.5kb downstream 0.5kb downstream 500 false Chr01: 8192291-8192790 Eucalyptus grandis
Eucgr.A01318 1.0kb upstream 1.0kb upstream 3347 true Chr01: 8188944-8192290 Eucalyptus grandis
Eucgr.A01318 1.0kb upstream 1.0kb upstream 1000 false Chr01: 8188944-8189943 Eucalyptus grandis
Eucgr.A01318 1.0kb downstream 1.0kb downstream 3347 true Chr01: 8189944-8193290 Eucalyptus grandis
Eucgr.A01318 1.0kb downstream 1.0kb downstream 1000 false Chr01: 8192291-8193290 Eucalyptus grandis
Eucgr.A01318 2.0kb upstream 2.0kb upstream 4347 true Chr01: 8187944-8192290 Eucalyptus grandis
Eucgr.A01318 2.0kb upstream 2.0kb upstream 2000 false Chr01: 8187944-8189943 Eucalyptus grandis
Eucgr.A01318 2.0kb downstream 2.0kb downstream 4347 true Chr01: 8189944-8194290 Eucalyptus grandis
Eucgr.A01318 2.0kb downstream 2.0kb downstream 2000 false Chr01: 8192291-8194290 Eucalyptus grandis
Eucgr.A01318 5.0kb upstream 5.0kb upstream 7347 true Chr01: 8184944-8192290 Eucalyptus grandis
Eucgr.A01318 5.0kb upstream 5.0kb upstream 5000 false Chr01: 8184944-8189943 Eucalyptus grandis
Eucgr.A01318 5.0kb downstream 5.0kb downstream 7347 true Chr01: 8189944-8197290 Eucalyptus grandis
Eucgr.A01318 5.0kb downstream 5.0kb downstream 5000 false Chr01: 8192291-8197290 Eucalyptus grandis
Eucgr.A01318 10.0kb upstream 10.0kb upstream 12347 true Chr01: 8179944-8192290 Eucalyptus grandis
Eucgr.A01318 10.0kb upstream 10.0kb upstream 10000 false Chr01: 8179944-8189943 Eucalyptus grandis
Eucgr.A01318 10.0kb downstream 10.0kb downstream 12347 true Chr01: 8189944-8202290 Eucalyptus grandis
Eucgr.A01318 10.0kb downstream 10.0kb downstream 10000 false Chr01: 8192291-8202290 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072625 5270 Rosid View MSA
123753744 5271 Pentapetalae View MSA
122797324 5272 Eudicot View MSA
122043990 5273 Angiosperm View MSA
121348270 5274 Embryophyte View MSA
123380801 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.4927 0.0 45.323    
cufflinks 39.1617 0.0 87.6253    
cufflinks 18.3328 0.0 40.5754    
cufflinks 71.3451 0.0 165.455 High High
cufflinks 48.5102 0.0 109.568 High  
cufflinks 17.4815 0.0 38.7132    

0 Strain