Gene : Eucgr.A02138 E. grandis v2.0
Defline:  (1 of 2) PTHR11669:SF1 - REPLICATION FACTOR C SUBUNIT 3 Genomic Order:  1920
Name:  ? Eucgr.A02138 Secondary Identifier:  ? PAC:32047441
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02138 0.5kb upstream 0.5kb upstream 4700 true Chr01: 36739318-36744017 Eucalyptus grandis
Eucgr.A02138 0.5kb upstream 0.5kb upstream 500 false Chr01: 36743518-36744017 Eucalyptus grandis
Eucgr.A02138 0.5kb downstream 0.5kb downstream 4700 true Chr01: 36738818-36743517 Eucalyptus grandis
Eucgr.A02138 0.5kb downstream 0.5kb downstream 500 false Chr01: 36738818-36739317 Eucalyptus grandis
Eucgr.A02138 1.0kb upstream 1.0kb upstream 5200 true Chr01: 36739318-36744517 Eucalyptus grandis
Eucgr.A02138 1.0kb upstream 1.0kb upstream 1000 false Chr01: 36743518-36744517 Eucalyptus grandis
Eucgr.A02138 1.0kb downstream 1.0kb downstream 5200 true Chr01: 36738318-36743517 Eucalyptus grandis
Eucgr.A02138 1.0kb downstream 1.0kb downstream 1000 false Chr01: 36738318-36739317 Eucalyptus grandis
Eucgr.A02138 2.0kb upstream 2.0kb upstream 6200 true Chr01: 36739318-36745517 Eucalyptus grandis
Eucgr.A02138 2.0kb upstream 2.0kb upstream 2000 false Chr01: 36743518-36745517 Eucalyptus grandis
Eucgr.A02138 2.0kb downstream 2.0kb downstream 6200 true Chr01: 36737318-36743517 Eucalyptus grandis
Eucgr.A02138 2.0kb downstream 2.0kb downstream 2000 false Chr01: 36737318-36739317 Eucalyptus grandis
Eucgr.A02138 5.0kb upstream 5.0kb upstream 9200 true Chr01: 36739318-36748517 Eucalyptus grandis
Eucgr.A02138 5.0kb upstream 5.0kb upstream 5000 false Chr01: 36743518-36748517 Eucalyptus grandis
Eucgr.A02138 5.0kb downstream 5.0kb downstream 9200 true Chr01: 36734318-36743517 Eucalyptus grandis
Eucgr.A02138 5.0kb downstream 5.0kb downstream 5000 false Chr01: 36734318-36739317 Eucalyptus grandis
Eucgr.A02138 10.0kb upstream 10.0kb upstream 14200 true Chr01: 36739318-36753517 Eucalyptus grandis
Eucgr.A02138 10.0kb upstream 10.0kb upstream 10000 false Chr01: 36743518-36753517 Eucalyptus grandis
Eucgr.A02138 10.0kb downstream 10.0kb downstream 14200 true Chr01: 36729318-36743517 Eucalyptus grandis
Eucgr.A02138 10.0kb downstream 10.0kb downstream 10000 false Chr01: 36729318-36739317 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061589 5270 Rosid View MSA
123739027 5271 Pentapetalae View MSA
122788068 5272 Eudicot View MSA
122043390 5273 Angiosperm View MSA
121345700 5274 Embryophyte View MSA
123424767 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.59859 0.0 20.7474    
cufflinks 11.111 0.0 26.1019    
cufflinks 12.006 0.0 28.0337   High
cufflinks 7.74384 0.0 18.8081   Low
cufflinks 10.5288 0.0 24.8926    
cufflinks 9.3398 0.0 22.3764    

0 Strain