Gene : Eucgr.A02102 E. grandis v2.0
Defline:  (1 of 2) PTHR33646:SF2 - F20H23.8 PROTEIN-RELATED Genomic Order:  1888
Name:  ? Eucgr.A02102 Secondary Identifier:  ? PAC:32046926
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02102 0.5kb upstream 0.5kb upstream 2936 true Chr01: 36448519-36451454 Eucalyptus grandis
Eucgr.A02102 0.5kb upstream 0.5kb upstream 500 false Chr01: 36450955-36451454 Eucalyptus grandis
Eucgr.A02102 0.5kb downstream 0.5kb downstream 2936 true Chr01: 36448019-36450954 Eucalyptus grandis
Eucgr.A02102 0.5kb downstream 0.5kb downstream 500 false Chr01: 36448019-36448518 Eucalyptus grandis
Eucgr.A02102 1.0kb upstream 1.0kb upstream 3436 true Chr01: 36448519-36451954 Eucalyptus grandis
Eucgr.A02102 1.0kb upstream 1.0kb upstream 1000 false Chr01: 36450955-36451954 Eucalyptus grandis
Eucgr.A02102 1.0kb downstream 1.0kb downstream 3436 true Chr01: 36447519-36450954 Eucalyptus grandis
Eucgr.A02102 1.0kb downstream 1.0kb downstream 1000 false Chr01: 36447519-36448518 Eucalyptus grandis
Eucgr.A02102 2.0kb upstream 2.0kb upstream 4436 true Chr01: 36448519-36452954 Eucalyptus grandis
Eucgr.A02102 2.0kb upstream 2.0kb upstream 2000 false Chr01: 36450955-36452954 Eucalyptus grandis
Eucgr.A02102 2.0kb downstream 2.0kb downstream 4436 true Chr01: 36446519-36450954 Eucalyptus grandis
Eucgr.A02102 2.0kb downstream 2.0kb downstream 2000 false Chr01: 36446519-36448518 Eucalyptus grandis
Eucgr.A02102 5.0kb upstream 5.0kb upstream 7436 true Chr01: 36448519-36455954 Eucalyptus grandis
Eucgr.A02102 5.0kb upstream 5.0kb upstream 5000 false Chr01: 36450955-36455954 Eucalyptus grandis
Eucgr.A02102 5.0kb downstream 5.0kb downstream 7436 true Chr01: 36443519-36450954 Eucalyptus grandis
Eucgr.A02102 5.0kb downstream 5.0kb downstream 5000 false Chr01: 36443519-36448518 Eucalyptus grandis
Eucgr.A02102 10.0kb upstream 10.0kb upstream 12436 true Chr01: 36448519-36460954 Eucalyptus grandis
Eucgr.A02102 10.0kb upstream 10.0kb upstream 10000 false Chr01: 36450955-36460954 Eucalyptus grandis
Eucgr.A02102 10.0kb downstream 10.0kb downstream 12436 true Chr01: 36438519-36450954 Eucalyptus grandis
Eucgr.A02102 10.0kb downstream 10.0kb downstream 10000 false Chr01: 36438519-36448518 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064474 5270 Rosid View MSA
123748778 5271 Pentapetalae View MSA
122792798 5272 Eudicot View MSA
122044291 5273 Angiosperm View MSA
121310268 5274 Embryophyte View MSA
123347804 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.7754 0.0 65.8088    
cufflinks 25.2656 0.0 62.1855    
cufflinks 32.1647 0.0 79.0526 High  
cufflinks 23.7267 0.0 60.2623    
cufflinks 57.0775 0.0 147.209 High  
cufflinks 105.926 0.0 293.105 High High

0 Strain