Gene : Eucgr.A01994 E. grandis v2.0
Defline:  (1 of 5) PTHR12741:SF16 - CALLOSE SYNTHASE 7-RELATED Genomic Order:  1793
Name:  ? Eucgr.A01994 Secondary Identifier:  ? PAC:32048038
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6773 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01994 0.5kb upstream 0.5kb upstream 15315 true Chr01: 35325284-35340598 Eucalyptus grandis
Eucgr.A01994 0.5kb upstream 0.5kb upstream 500 false Chr01: 35340099-35340598 Eucalyptus grandis
Eucgr.A01994 0.5kb downstream 0.5kb downstream 15315 true Chr01: 35324784-35340098 Eucalyptus grandis
Eucgr.A01994 0.5kb downstream 0.5kb downstream 500 false Chr01: 35324784-35325283 Eucalyptus grandis
Eucgr.A01994 1.0kb upstream 1.0kb upstream 15815 true Chr01: 35325284-35341098 Eucalyptus grandis
Eucgr.A01994 1.0kb upstream 1.0kb upstream 1000 false Chr01: 35340099-35341098 Eucalyptus grandis
Eucgr.A01994 1.0kb downstream 1.0kb downstream 15815 true Chr01: 35324284-35340098 Eucalyptus grandis
Eucgr.A01994 1.0kb downstream 1.0kb downstream 1000 false Chr01: 35324284-35325283 Eucalyptus grandis
Eucgr.A01994 2.0kb upstream 2.0kb upstream 16815 true Chr01: 35325284-35342098 Eucalyptus grandis
Eucgr.A01994 2.0kb upstream 2.0kb upstream 2000 false Chr01: 35340099-35342098 Eucalyptus grandis
Eucgr.A01994 2.0kb downstream 2.0kb downstream 16815 true Chr01: 35323284-35340098 Eucalyptus grandis
Eucgr.A01994 2.0kb downstream 2.0kb downstream 2000 false Chr01: 35323284-35325283 Eucalyptus grandis
Eucgr.A01994 5.0kb upstream 5.0kb upstream 19815 true Chr01: 35325284-35345098 Eucalyptus grandis
Eucgr.A01994 5.0kb upstream 5.0kb upstream 5000 false Chr01: 35340099-35345098 Eucalyptus grandis
Eucgr.A01994 5.0kb downstream 5.0kb downstream 19815 true Chr01: 35320284-35340098 Eucalyptus grandis
Eucgr.A01994 5.0kb downstream 5.0kb downstream 5000 false Chr01: 35320284-35325283 Eucalyptus grandis
Eucgr.A01994 10.0kb upstream 10.0kb upstream 24815 true Chr01: 35325284-35350098 Eucalyptus grandis
Eucgr.A01994 10.0kb upstream 10.0kb upstream 10000 false Chr01: 35340099-35350098 Eucalyptus grandis
Eucgr.A01994 10.0kb downstream 10.0kb downstream 24815 true Chr01: 35315284-35340098 Eucalyptus grandis
Eucgr.A01994 10.0kb downstream 10.0kb downstream 10000 false Chr01: 35315284-35325283 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124051035 5270 Rosid View MSA
123749286 5271 Pentapetalae View MSA
122796440 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.669563 0.0 1.92646    
cufflinks 0.783589 0.0 2.2332    
cufflinks 0.109864 0.0 0.444387 Low Low
cufflinks 2.3216 0.0 6.24698   High
cufflinks 1.82485 0.0 4.6386    
cufflinks 0.619233 0.0 1.85017 Low  

0 Strain