Gene : Eucgr.A01889 E. grandis v2.0
Defline:  (1 of 1) PTHR10388:SF20 - APO PROTEIN 4, MITOCHONDRIAL Genomic Order:  1702
Name:  ? Eucgr.A01889 Secondary Identifier:  ? PAC:32047268
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01889 0.5kb upstream 0.5kb upstream 4385 true Chr01: 34028616-34033000 Eucalyptus grandis
Eucgr.A01889 0.5kb upstream 0.5kb upstream 500 false Chr01: 34028616-34029115 Eucalyptus grandis
Eucgr.A01889 0.5kb downstream 0.5kb downstream 4385 true Chr01: 34029116-34033500 Eucalyptus grandis
Eucgr.A01889 0.5kb downstream 0.5kb downstream 500 false Chr01: 34033001-34033500 Eucalyptus grandis
Eucgr.A01889 1.0kb upstream 1.0kb upstream 4885 true Chr01: 34028116-34033000 Eucalyptus grandis
Eucgr.A01889 1.0kb upstream 1.0kb upstream 1000 false Chr01: 34028116-34029115 Eucalyptus grandis
Eucgr.A01889 1.0kb downstream 1.0kb downstream 4885 true Chr01: 34029116-34034000 Eucalyptus grandis
Eucgr.A01889 1.0kb downstream 1.0kb downstream 1000 false Chr01: 34033001-34034000 Eucalyptus grandis
Eucgr.A01889 2.0kb upstream 2.0kb upstream 5885 true Chr01: 34027116-34033000 Eucalyptus grandis
Eucgr.A01889 2.0kb upstream 2.0kb upstream 2000 false Chr01: 34027116-34029115 Eucalyptus grandis
Eucgr.A01889 2.0kb downstream 2.0kb downstream 5885 true Chr01: 34029116-34035000 Eucalyptus grandis
Eucgr.A01889 2.0kb downstream 2.0kb downstream 2000 false Chr01: 34033001-34035000 Eucalyptus grandis
Eucgr.A01889 5.0kb upstream 5.0kb upstream 8885 true Chr01: 34024116-34033000 Eucalyptus grandis
Eucgr.A01889 5.0kb upstream 5.0kb upstream 5000 false Chr01: 34024116-34029115 Eucalyptus grandis
Eucgr.A01889 5.0kb downstream 5.0kb downstream 8885 true Chr01: 34029116-34038000 Eucalyptus grandis
Eucgr.A01889 5.0kb downstream 5.0kb downstream 5000 false Chr01: 34033001-34038000 Eucalyptus grandis
Eucgr.A01889 10.0kb upstream 10.0kb upstream 13885 true Chr01: 34019116-34033000 Eucalyptus grandis
Eucgr.A01889 10.0kb upstream 10.0kb upstream 10000 false Chr01: 34019116-34029115 Eucalyptus grandis
Eucgr.A01889 10.0kb downstream 10.0kb downstream 13885 true Chr01: 34029116-34043000 Eucalyptus grandis
Eucgr.A01889 10.0kb downstream 10.0kb downstream 10000 false Chr01: 34033001-34043000 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061429 5270 Rosid View MSA
123737986 5271 Pentapetalae View MSA
122787087 5272 Eudicot View MSA
122049578 5273 Angiosperm View MSA
121311484 5274 Embryophyte View MSA
123348776 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.48632 0.0 8.66273    
cufflinks 2.95132 0.0 7.41317    
cufflinks 3.44076 0.0 8.54074    
cufflinks 4.15886 0.0 10.0829    
cufflinks 5.15423 0.0 12.272   High
cufflinks 2.95698 0.0 7.50157    

0 Strain