Gene : Eucgr.A01810 E. grandis v2.0
Defline:  (1 of 1) PTHR10794:SF38 - CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN Genomic Order:  1630
Name:  ? Eucgr.A01810 Secondary Identifier:  ? PAC:32047003
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01810 0.5kb upstream 0.5kb upstream 4061 true Chr01: 33084877-33088937 Eucalyptus grandis
Eucgr.A01810 0.5kb upstream 0.5kb upstream 500 false Chr01: 33084877-33085376 Eucalyptus grandis
Eucgr.A01810 0.5kb downstream 0.5kb downstream 4061 true Chr01: 33085377-33089437 Eucalyptus grandis
Eucgr.A01810 0.5kb downstream 0.5kb downstream 500 false Chr01: 33088938-33089437 Eucalyptus grandis
Eucgr.A01810 1.0kb upstream 1.0kb upstream 4561 true Chr01: 33084377-33088937 Eucalyptus grandis
Eucgr.A01810 1.0kb upstream 1.0kb upstream 1000 false Chr01: 33084377-33085376 Eucalyptus grandis
Eucgr.A01810 1.0kb downstream 1.0kb downstream 4561 true Chr01: 33085377-33089937 Eucalyptus grandis
Eucgr.A01810 1.0kb downstream 1.0kb downstream 1000 false Chr01: 33088938-33089937 Eucalyptus grandis
Eucgr.A01810 2.0kb upstream 2.0kb upstream 5561 true Chr01: 33083377-33088937 Eucalyptus grandis
Eucgr.A01810 2.0kb upstream 2.0kb upstream 2000 false Chr01: 33083377-33085376 Eucalyptus grandis
Eucgr.A01810 2.0kb downstream 2.0kb downstream 5561 true Chr01: 33085377-33090937 Eucalyptus grandis
Eucgr.A01810 2.0kb downstream 2.0kb downstream 2000 false Chr01: 33088938-33090937 Eucalyptus grandis
Eucgr.A01810 5.0kb upstream 5.0kb upstream 8561 true Chr01: 33080377-33088937 Eucalyptus grandis
Eucgr.A01810 5.0kb upstream 5.0kb upstream 5000 false Chr01: 33080377-33085376 Eucalyptus grandis
Eucgr.A01810 5.0kb downstream 5.0kb downstream 8561 true Chr01: 33085377-33093937 Eucalyptus grandis
Eucgr.A01810 5.0kb downstream 5.0kb downstream 5000 false Chr01: 33088938-33093937 Eucalyptus grandis
Eucgr.A01810 10.0kb upstream 10.0kb upstream 13561 true Chr01: 33075377-33088937 Eucalyptus grandis
Eucgr.A01810 10.0kb upstream 10.0kb upstream 10000 false Chr01: 33075377-33085376 Eucalyptus grandis
Eucgr.A01810 10.0kb downstream 10.0kb downstream 13561 true Chr01: 33085377-33098937 Eucalyptus grandis
Eucgr.A01810 10.0kb downstream 10.0kb downstream 10000 false Chr01: 33088938-33098937 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027170 5273 Angiosperm View MSA
124061477 5270 Rosid View MSA
123739167 5271 Pentapetalae View MSA
122788246 5272 Eudicot View MSA
121344310 5274 Embryophyte View MSA
123428279 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.37362 0.0 12.5096    
cufflinks 2.39401 0.0 6.98538   Low
cufflinks 4.02277 0.0 11.2375    
cufflinks 5.13862 0.0 14.9657    
cufflinks 12.1274 0.0 35.4965   High
cufflinks 9.1199 0.0 23.5696    

0 Strain