Gene : Eucgr.A01786 E. grandis v2.0
Defline:  (1 of 1) PTHR12234//PTHR12234:SF3 - FORMIMINOTRANSFERASE-CYCLODEAMINASE Genomic Order:  1608
Name:  ? Eucgr.A01786 Secondary Identifier:  ? PAC:32047836
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-3841 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01786 0.5kb upstream 0.5kb upstream 4146 true Chr01: 32819559-32823704 Eucalyptus grandis
Eucgr.A01786 0.5kb upstream 0.5kb upstream 500 false Chr01: 32819559-32820058 Eucalyptus grandis
Eucgr.A01786 0.5kb downstream 0.5kb downstream 4146 true Chr01: 32820059-32824204 Eucalyptus grandis
Eucgr.A01786 0.5kb downstream 0.5kb downstream 500 false Chr01: 32823705-32824204 Eucalyptus grandis
Eucgr.A01786 1.0kb upstream 1.0kb upstream 4646 true Chr01: 32819059-32823704 Eucalyptus grandis
Eucgr.A01786 1.0kb upstream 1.0kb upstream 1000 false Chr01: 32819059-32820058 Eucalyptus grandis
Eucgr.A01786 1.0kb downstream 1.0kb downstream 4646 true Chr01: 32820059-32824704 Eucalyptus grandis
Eucgr.A01786 1.0kb downstream 1.0kb downstream 1000 false Chr01: 32823705-32824704 Eucalyptus grandis
Eucgr.A01786 2.0kb upstream 2.0kb upstream 5646 true Chr01: 32818059-32823704 Eucalyptus grandis
Eucgr.A01786 2.0kb upstream 2.0kb upstream 2000 false Chr01: 32818059-32820058 Eucalyptus grandis
Eucgr.A01786 2.0kb downstream 2.0kb downstream 5646 true Chr01: 32820059-32825704 Eucalyptus grandis
Eucgr.A01786 2.0kb downstream 2.0kb downstream 2000 false Chr01: 32823705-32825704 Eucalyptus grandis
Eucgr.A01786 5.0kb upstream 5.0kb upstream 8646 true Chr01: 32815059-32823704 Eucalyptus grandis
Eucgr.A01786 5.0kb upstream 5.0kb upstream 5000 false Chr01: 32815059-32820058 Eucalyptus grandis
Eucgr.A01786 5.0kb downstream 5.0kb downstream 8646 true Chr01: 32820059-32828704 Eucalyptus grandis
Eucgr.A01786 5.0kb downstream 5.0kb downstream 5000 false Chr01: 32823705-32828704 Eucalyptus grandis
Eucgr.A01786 10.0kb upstream 10.0kb upstream 13646 true Chr01: 32810059-32823704 Eucalyptus grandis
Eucgr.A01786 10.0kb upstream 10.0kb upstream 10000 false Chr01: 32810059-32820058 Eucalyptus grandis
Eucgr.A01786 10.0kb downstream 10.0kb downstream 13646 true Chr01: 32820059-32833704 Eucalyptus grandis
Eucgr.A01786 10.0kb downstream 10.0kb downstream 10000 false Chr01: 32823705-32833704 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070892 5270 Rosid View MSA
123745948 5271 Pentapetalae View MSA
122795317 5272 Eudicot View MSA
122048049 5273 Angiosperm View MSA
121344000 5274 Embryophyte View MSA
123424939 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.69632 0.0 5.57317   High
cufflinks 0.334339 0.0 2.10084 Low  
cufflinks 0.781283 0.0 2.95061    
cufflinks 0.211244 0.0 1.34499 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.04343 0.0 5.20608    

0 Strain