Gene : Eucgr.A01790 E. grandis v2.0
Defline:  (1 of 1) PTHR31901:SF10 - AUXIN-RESPONSIVE GH3 FAMILY PROTEIN Genomic Order:  1612
Name:  ? Eucgr.A01790 Secondary Identifier:  ? PAC:32047935
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01790 0.5kb upstream 0.5kb upstream 2339 true Chr01: 32858982-32861320 Eucalyptus grandis
Eucgr.A01790 0.5kb upstream 0.5kb upstream 500 false Chr01: 32860821-32861320 Eucalyptus grandis
Eucgr.A01790 0.5kb downstream 0.5kb downstream 2339 true Chr01: 32858482-32860820 Eucalyptus grandis
Eucgr.A01790 0.5kb downstream 0.5kb downstream 500 false Chr01: 32858482-32858981 Eucalyptus grandis
Eucgr.A01790 1.0kb upstream 1.0kb upstream 2839 true Chr01: 32858982-32861820 Eucalyptus grandis
Eucgr.A01790 1.0kb upstream 1.0kb upstream 1000 false Chr01: 32860821-32861820 Eucalyptus grandis
Eucgr.A01790 1.0kb downstream 1.0kb downstream 2839 true Chr01: 32857982-32860820 Eucalyptus grandis
Eucgr.A01790 1.0kb downstream 1.0kb downstream 1000 false Chr01: 32857982-32858981 Eucalyptus grandis
Eucgr.A01790 2.0kb upstream 2.0kb upstream 3839 true Chr01: 32858982-32862820 Eucalyptus grandis
Eucgr.A01790 2.0kb upstream 2.0kb upstream 2000 false Chr01: 32860821-32862820 Eucalyptus grandis
Eucgr.A01790 2.0kb downstream 2.0kb downstream 3839 true Chr01: 32856982-32860820 Eucalyptus grandis
Eucgr.A01790 2.0kb downstream 2.0kb downstream 2000 false Chr01: 32856982-32858981 Eucalyptus grandis
Eucgr.A01790 5.0kb upstream 5.0kb upstream 6839 true Chr01: 32858982-32865820 Eucalyptus grandis
Eucgr.A01790 5.0kb upstream 5.0kb upstream 5000 false Chr01: 32860821-32865820 Eucalyptus grandis
Eucgr.A01790 5.0kb downstream 5.0kb downstream 6839 true Chr01: 32853982-32860820 Eucalyptus grandis
Eucgr.A01790 5.0kb downstream 5.0kb downstream 5000 false Chr01: 32853982-32858981 Eucalyptus grandis
Eucgr.A01790 10.0kb upstream 10.0kb upstream 11839 true Chr01: 32858982-32870820 Eucalyptus grandis
Eucgr.A01790 10.0kb upstream 10.0kb upstream 10000 false Chr01: 32860821-32870820 Eucalyptus grandis
Eucgr.A01790 10.0kb downstream 10.0kb downstream 11839 true Chr01: 32848982-32860820 Eucalyptus grandis
Eucgr.A01790 10.0kb downstream 10.0kb downstream 10000 false Chr01: 32848982-32858981 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061485 5270 Rosid View MSA
123750974 5271 Pentapetalae View MSA
122788178 5272 Eudicot View MSA
122044155 5273 Angiosperm View MSA
121349637 5274 Embryophyte View MSA
123381383 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.44172 0.0 9.01926    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.85031 0.0 12.3862    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.968597 0.0 2.86373   Low

0 Strain