Gene : Eucgr.A01759 E. grandis v2.0
Defline:  (1 of 32) PF00069//PF00954//PF01453//PF08276 - Protein kinase domain (Pkinase) // S-locus glycoprotein domain (S_locus_glycop) // D-mannose binding lectin (B_lectin) // PAN-like domain (PAN_2) Genomic Order:  1584
Name:  ? Eucgr.A01759 Secondary Identifier:  ? PAC:32045860
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01759 0.5kb upstream 0.5kb upstream 3070 true Chr01: 32521856-32524925 Eucalyptus grandis
Eucgr.A01759 0.5kb upstream 0.5kb upstream 500 false Chr01: 32521856-32522355 Eucalyptus grandis
Eucgr.A01759 0.5kb downstream 0.5kb downstream 3070 true Chr01: 32522356-32525425 Eucalyptus grandis
Eucgr.A01759 0.5kb downstream 0.5kb downstream 500 false Chr01: 32524926-32525425 Eucalyptus grandis
Eucgr.A01759 1.0kb upstream 1.0kb upstream 3570 true Chr01: 32521356-32524925 Eucalyptus grandis
Eucgr.A01759 1.0kb upstream 1.0kb upstream 1000 false Chr01: 32521356-32522355 Eucalyptus grandis
Eucgr.A01759 1.0kb downstream 1.0kb downstream 3570 true Chr01: 32522356-32525925 Eucalyptus grandis
Eucgr.A01759 1.0kb downstream 1.0kb downstream 1000 false Chr01: 32524926-32525925 Eucalyptus grandis
Eucgr.A01759 2.0kb upstream 2.0kb upstream 4570 true Chr01: 32520356-32524925 Eucalyptus grandis
Eucgr.A01759 2.0kb upstream 2.0kb upstream 2000 false Chr01: 32520356-32522355 Eucalyptus grandis
Eucgr.A01759 2.0kb downstream 2.0kb downstream 4570 true Chr01: 32522356-32526925 Eucalyptus grandis
Eucgr.A01759 2.0kb downstream 2.0kb downstream 2000 false Chr01: 32524926-32526925 Eucalyptus grandis
Eucgr.A01759 5.0kb upstream 5.0kb upstream 7570 true Chr01: 32517356-32524925 Eucalyptus grandis
Eucgr.A01759 5.0kb upstream 5.0kb upstream 5000 false Chr01: 32517356-32522355 Eucalyptus grandis
Eucgr.A01759 5.0kb downstream 5.0kb downstream 7570 true Chr01: 32522356-32529925 Eucalyptus grandis
Eucgr.A01759 5.0kb downstream 5.0kb downstream 5000 false Chr01: 32524926-32529925 Eucalyptus grandis
Eucgr.A01759 10.0kb upstream 10.0kb upstream 12570 true Chr01: 32512356-32524925 Eucalyptus grandis
Eucgr.A01759 10.0kb upstream 10.0kb upstream 10000 false Chr01: 32512356-32522355 Eucalyptus grandis
Eucgr.A01759 10.0kb downstream 10.0kb downstream 12570 true Chr01: 32522356-32534925 Eucalyptus grandis
Eucgr.A01759 10.0kb downstream 10.0kb downstream 10000 false Chr01: 32524926-32534925 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073959 5270 Rosid View MSA
123747551 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.729182 0.0 2.07673    
cufflinks 0.0504895 0.0 0.20815 Low Low
cufflinks 0.827809 0.0 2.32044    
cufflinks 0.111383 0.0 0.398101 Low  
cufflinks 1.41793 0.0 3.77022    
cufflinks 1.8534 0.0 4.82273    

0 Strain