Gene : Eucgr.A01765 E. grandis v2.0
Defline:  (1 of 32) PF00069//PF00954//PF01453//PF08276 - Protein kinase domain (Pkinase) // S-locus glycoprotein domain (S_locus_glycop) // D-mannose binding lectin (B_lectin) // PAN-like domain (PAN_2) Genomic Order:  1587
Name:  ? Eucgr.A01765 Secondary Identifier:  ? PAC:32046708
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01765 0.5kb upstream 0.5kb upstream 2984 true Chr01: 32635409-32638392 Eucalyptus grandis
Eucgr.A01765 0.5kb upstream 0.5kb upstream 500 false Chr01: 32635409-32635908 Eucalyptus grandis
Eucgr.A01765 0.5kb downstream 0.5kb downstream 2984 true Chr01: 32635909-32638892 Eucalyptus grandis
Eucgr.A01765 0.5kb downstream 0.5kb downstream 500 false Chr01: 32638393-32638892 Eucalyptus grandis
Eucgr.A01765 1.0kb upstream 1.0kb upstream 3484 true Chr01: 32634909-32638392 Eucalyptus grandis
Eucgr.A01765 1.0kb upstream 1.0kb upstream 1000 false Chr01: 32634909-32635908 Eucalyptus grandis
Eucgr.A01765 1.0kb downstream 1.0kb downstream 3484 true Chr01: 32635909-32639392 Eucalyptus grandis
Eucgr.A01765 1.0kb downstream 1.0kb downstream 1000 false Chr01: 32638393-32639392 Eucalyptus grandis
Eucgr.A01765 2.0kb upstream 2.0kb upstream 4484 true Chr01: 32633909-32638392 Eucalyptus grandis
Eucgr.A01765 2.0kb upstream 2.0kb upstream 2000 false Chr01: 32633909-32635908 Eucalyptus grandis
Eucgr.A01765 2.0kb downstream 2.0kb downstream 4484 true Chr01: 32635909-32640392 Eucalyptus grandis
Eucgr.A01765 2.0kb downstream 2.0kb downstream 2000 false Chr01: 32638393-32640392 Eucalyptus grandis
Eucgr.A01765 5.0kb upstream 5.0kb upstream 7484 true Chr01: 32630909-32638392 Eucalyptus grandis
Eucgr.A01765 5.0kb upstream 5.0kb upstream 5000 false Chr01: 32630909-32635908 Eucalyptus grandis
Eucgr.A01765 5.0kb downstream 5.0kb downstream 7484 true Chr01: 32635909-32643392 Eucalyptus grandis
Eucgr.A01765 5.0kb downstream 5.0kb downstream 5000 false Chr01: 32638393-32643392 Eucalyptus grandis
Eucgr.A01765 10.0kb upstream 10.0kb upstream 12484 true Chr01: 32625909-32638392 Eucalyptus grandis
Eucgr.A01765 10.0kb upstream 10.0kb upstream 10000 false Chr01: 32625909-32635908 Eucalyptus grandis
Eucgr.A01765 10.0kb downstream 10.0kb downstream 12484 true Chr01: 32635909-32648392 Eucalyptus grandis
Eucgr.A01765 10.0kb downstream 10.0kb downstream 10000 false Chr01: 32638393-32648392 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073959 5270 Rosid View MSA
123747551 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.26361 0.0 3.41252    
cufflinks 1.35424 0.0 3.62022    
cufflinks 1.19644 0.0 3.24122    
cufflinks 0.265156 0.0 0.847648 Low Low
cufflinks 0.835236 0.0 2.34893    
cufflinks 2.55529 0.0 6.45554   High

0 Strain