Gene : Eucgr.A02507 E. grandis v2.0
Defline:  (1 of 1) PTHR23270:SF10 - PROTEIN RRP5 HOMOLOG Genomic Order:  2248
Name:  ? Eucgr.A02507 Secondary Identifier:  ? PAC:32047190
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02507 0.5kb upstream 0.5kb upstream 24302 true Chr01: 40339211-40363512 Eucalyptus grandis
Eucgr.A02507 0.5kb upstream 0.5kb upstream 500 false Chr01: 40339211-40339710 Eucalyptus grandis
Eucgr.A02507 0.5kb downstream 0.5kb downstream 24302 true Chr01: 40339711-40364012 Eucalyptus grandis
Eucgr.A02507 0.5kb downstream 0.5kb downstream 500 false Chr01: 40363513-40364012 Eucalyptus grandis
Eucgr.A02507 1.0kb upstream 1.0kb upstream 24802 true Chr01: 40338711-40363512 Eucalyptus grandis
Eucgr.A02507 1.0kb upstream 1.0kb upstream 1000 false Chr01: 40338711-40339710 Eucalyptus grandis
Eucgr.A02507 1.0kb downstream 1.0kb downstream 24802 true Chr01: 40339711-40364512 Eucalyptus grandis
Eucgr.A02507 1.0kb downstream 1.0kb downstream 1000 false Chr01: 40363513-40364512 Eucalyptus grandis
Eucgr.A02507 2.0kb upstream 2.0kb upstream 25802 true Chr01: 40337711-40363512 Eucalyptus grandis
Eucgr.A02507 2.0kb upstream 2.0kb upstream 2000 false Chr01: 40337711-40339710 Eucalyptus grandis
Eucgr.A02507 2.0kb downstream 2.0kb downstream 25802 true Chr01: 40339711-40365512 Eucalyptus grandis
Eucgr.A02507 2.0kb downstream 2.0kb downstream 2000 false Chr01: 40363513-40365512 Eucalyptus grandis
Eucgr.A02507 5.0kb upstream 5.0kb upstream 28802 true Chr01: 40334711-40363512 Eucalyptus grandis
Eucgr.A02507 5.0kb upstream 5.0kb upstream 5000 false Chr01: 40334711-40339710 Eucalyptus grandis
Eucgr.A02507 5.0kb downstream 5.0kb downstream 28802 true Chr01: 40339711-40368512 Eucalyptus grandis
Eucgr.A02507 5.0kb downstream 5.0kb downstream 5000 false Chr01: 40363513-40368512 Eucalyptus grandis
Eucgr.A02507 10.0kb upstream 10.0kb upstream 33802 true Chr01: 40329711-40363512 Eucalyptus grandis
Eucgr.A02507 10.0kb upstream 10.0kb upstream 10000 false Chr01: 40329711-40339710 Eucalyptus grandis
Eucgr.A02507 10.0kb downstream 10.0kb downstream 33802 true Chr01: 40339711-40373512 Eucalyptus grandis
Eucgr.A02507 10.0kb downstream 10.0kb downstream 10000 false Chr01: 40363513-40373512 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068160 5270 Rosid View MSA
123740236 5271 Pentapetalae View MSA
122787572 5272 Eudicot View MSA
122045709 5273 Angiosperm View MSA
121346258 5274 Embryophyte View MSA
123424813 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.74873 0.0 8.4099    
cufflinks 1.71016 0.0 4.03372   Low
cufflinks 4.08586 0.0 9.11519   High
cufflinks 2.05208 0.0 4.75019    
cufflinks 1.95681 0.0 4.57092    
cufflinks 3.61061 0.0 8.14178    

0 Strain