Gene : Eucgr.A02519 E. grandis v2.0
Defline:  (1 of 1) PTHR11205:SF24 - 40S RIBOSOMAL PROTEIN S5-1-RELATED Genomic Order:  2258
Name:  ? Eucgr.A02519 Secondary Identifier:  ? PAC:32047759
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02519 0.5kb upstream 0.5kb upstream 2895 true Chr01: 40499570-40502464 Eucalyptus grandis
Eucgr.A02519 0.5kb upstream 0.5kb upstream 500 false Chr01: 40499570-40500069 Eucalyptus grandis
Eucgr.A02519 0.5kb downstream 0.5kb downstream 2895 true Chr01: 40500070-40502964 Eucalyptus grandis
Eucgr.A02519 0.5kb downstream 0.5kb downstream 500 false Chr01: 40502465-40502964 Eucalyptus grandis
Eucgr.A02519 1.0kb upstream 1.0kb upstream 3395 true Chr01: 40499070-40502464 Eucalyptus grandis
Eucgr.A02519 1.0kb upstream 1.0kb upstream 1000 false Chr01: 40499070-40500069 Eucalyptus grandis
Eucgr.A02519 1.0kb downstream 1.0kb downstream 3395 true Chr01: 40500070-40503464 Eucalyptus grandis
Eucgr.A02519 1.0kb downstream 1.0kb downstream 1000 false Chr01: 40502465-40503464 Eucalyptus grandis
Eucgr.A02519 2.0kb upstream 2.0kb upstream 4395 true Chr01: 40498070-40502464 Eucalyptus grandis
Eucgr.A02519 2.0kb upstream 2.0kb upstream 2000 false Chr01: 40498070-40500069 Eucalyptus grandis
Eucgr.A02519 2.0kb downstream 2.0kb downstream 4395 true Chr01: 40500070-40504464 Eucalyptus grandis
Eucgr.A02519 2.0kb downstream 2.0kb downstream 2000 false Chr01: 40502465-40504464 Eucalyptus grandis
Eucgr.A02519 5.0kb upstream 5.0kb upstream 7395 true Chr01: 40495070-40502464 Eucalyptus grandis
Eucgr.A02519 5.0kb upstream 5.0kb upstream 5000 false Chr01: 40495070-40500069 Eucalyptus grandis
Eucgr.A02519 5.0kb downstream 5.0kb downstream 7395 true Chr01: 40500070-40507464 Eucalyptus grandis
Eucgr.A02519 5.0kb downstream 5.0kb downstream 5000 false Chr01: 40502465-40507464 Eucalyptus grandis
Eucgr.A02519 10.0kb upstream 10.0kb upstream 12395 true Chr01: 40490070-40502464 Eucalyptus grandis
Eucgr.A02519 10.0kb upstream 10.0kb upstream 10000 false Chr01: 40490070-40500069 Eucalyptus grandis
Eucgr.A02519 10.0kb downstream 10.0kb downstream 12395 true Chr01: 40500070-40512464 Eucalyptus grandis
Eucgr.A02519 10.0kb downstream 10.0kb downstream 10000 false Chr01: 40502465-40512464 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064641 5270 Rosid View MSA
123749742 5271 Pentapetalae View MSA
122785829 5272 Eudicot View MSA
122048966 5273 Angiosperm View MSA
121345669 5274 Embryophyte View MSA
123423957 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 263.103 0.0 769.751 High  
cufflinks 120.963 0.0 287.497 High Low
cufflinks 218.73 0.0 611.473 High  
cufflinks 193.673 0.0 537.224 High  
cufflinks 295.016 0.0 707.74 High High
cufflinks 236.073 0.0 554.094 High  

0 Strain