Gene : Eucgr.A02407 E. grandis v2.0
Defline:  (1 of 1) PTHR24078:SF276 - CHAPERONE PROTEIN DNAJ 6 Genomic Order:  2161
Name:  ? Eucgr.A02407 Secondary Identifier:  ? PAC:32049008
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02407 0.5kb upstream 0.5kb upstream 3901 true Chr01: 39457055-39460955 Eucalyptus grandis
Eucgr.A02407 0.5kb upstream 0.5kb upstream 500 false Chr01: 39460456-39460955 Eucalyptus grandis
Eucgr.A02407 0.5kb downstream 0.5kb downstream 3901 true Chr01: 39456555-39460455 Eucalyptus grandis
Eucgr.A02407 0.5kb downstream 0.5kb downstream 500 false Chr01: 39456555-39457054 Eucalyptus grandis
Eucgr.A02407 1.0kb upstream 1.0kb upstream 4401 true Chr01: 39457055-39461455 Eucalyptus grandis
Eucgr.A02407 1.0kb upstream 1.0kb upstream 1000 false Chr01: 39460456-39461455 Eucalyptus grandis
Eucgr.A02407 1.0kb downstream 1.0kb downstream 4401 true Chr01: 39456055-39460455 Eucalyptus grandis
Eucgr.A02407 1.0kb downstream 1.0kb downstream 1000 false Chr01: 39456055-39457054 Eucalyptus grandis
Eucgr.A02407 2.0kb upstream 2.0kb upstream 5401 true Chr01: 39457055-39462455 Eucalyptus grandis
Eucgr.A02407 2.0kb upstream 2.0kb upstream 2000 false Chr01: 39460456-39462455 Eucalyptus grandis
Eucgr.A02407 2.0kb downstream 2.0kb downstream 5401 true Chr01: 39455055-39460455 Eucalyptus grandis
Eucgr.A02407 2.0kb downstream 2.0kb downstream 2000 false Chr01: 39455055-39457054 Eucalyptus grandis
Eucgr.A02407 5.0kb upstream 5.0kb upstream 8401 true Chr01: 39457055-39465455 Eucalyptus grandis
Eucgr.A02407 5.0kb upstream 5.0kb upstream 5000 false Chr01: 39460456-39465455 Eucalyptus grandis
Eucgr.A02407 5.0kb downstream 5.0kb downstream 8401 true Chr01: 39452055-39460455 Eucalyptus grandis
Eucgr.A02407 5.0kb downstream 5.0kb downstream 5000 false Chr01: 39452055-39457054 Eucalyptus grandis
Eucgr.A02407 10.0kb upstream 10.0kb upstream 13401 true Chr01: 39457055-39470455 Eucalyptus grandis
Eucgr.A02407 10.0kb upstream 10.0kb upstream 10000 false Chr01: 39460456-39470455 Eucalyptus grandis
Eucgr.A02407 10.0kb downstream 10.0kb downstream 13401 true Chr01: 39447055-39460455 Eucalyptus grandis
Eucgr.A02407 10.0kb downstream 10.0kb downstream 10000 false Chr01: 39447055-39457054 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026181 5273 Angiosperm View MSA
124061055 5270 Rosid View MSA
123736570 5271 Pentapetalae View MSA
122788654 5272 Eudicot View MSA
121344155 5274 Embryophyte View MSA
123428818 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.16504 0.0 8.19902    
cufflinks 10.7125 0.0 24.6804   High
cufflinks 3.5885 0.0 9.14596    
cufflinks 5.47054 0.0 13.3192    
cufflinks 8.26146 0.0 19.4157    
cufflinks 0.663265 0.0 2.02498 Low Low

0 Strain