Gene : Eucgr.A02402 E. grandis v2.0
Defline:  (1 of 2) PTHR32060:SF5 - PEPTIDASE S41 FAMILY PROTEIN Genomic Order:  2156
Name:  ? Eucgr.A02402 Secondary Identifier:  ? PAC:32048983
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02402 0.5kb upstream 0.5kb upstream 6574 true Chr01: 39428860-39435433 Eucalyptus grandis
Eucgr.A02402 0.5kb upstream 0.5kb upstream 500 false Chr01: 39428860-39429359 Eucalyptus grandis
Eucgr.A02402 0.5kb downstream 0.5kb downstream 6574 true Chr01: 39429360-39435933 Eucalyptus grandis
Eucgr.A02402 0.5kb downstream 0.5kb downstream 500 false Chr01: 39435434-39435933 Eucalyptus grandis
Eucgr.A02402 1.0kb upstream 1.0kb upstream 7074 true Chr01: 39428360-39435433 Eucalyptus grandis
Eucgr.A02402 1.0kb upstream 1.0kb upstream 1000 false Chr01: 39428360-39429359 Eucalyptus grandis
Eucgr.A02402 1.0kb downstream 1.0kb downstream 7074 true Chr01: 39429360-39436433 Eucalyptus grandis
Eucgr.A02402 1.0kb downstream 1.0kb downstream 1000 false Chr01: 39435434-39436433 Eucalyptus grandis
Eucgr.A02402 2.0kb upstream 2.0kb upstream 8074 true Chr01: 39427360-39435433 Eucalyptus grandis
Eucgr.A02402 2.0kb upstream 2.0kb upstream 2000 false Chr01: 39427360-39429359 Eucalyptus grandis
Eucgr.A02402 2.0kb downstream 2.0kb downstream 8074 true Chr01: 39429360-39437433 Eucalyptus grandis
Eucgr.A02402 2.0kb downstream 2.0kb downstream 2000 false Chr01: 39435434-39437433 Eucalyptus grandis
Eucgr.A02402 5.0kb upstream 5.0kb upstream 11074 true Chr01: 39424360-39435433 Eucalyptus grandis
Eucgr.A02402 5.0kb upstream 5.0kb upstream 5000 false Chr01: 39424360-39429359 Eucalyptus grandis
Eucgr.A02402 5.0kb downstream 5.0kb downstream 11074 true Chr01: 39429360-39440433 Eucalyptus grandis
Eucgr.A02402 5.0kb downstream 5.0kb downstream 5000 false Chr01: 39435434-39440433 Eucalyptus grandis
Eucgr.A02402 10.0kb upstream 10.0kb upstream 16074 true Chr01: 39419360-39435433 Eucalyptus grandis
Eucgr.A02402 10.0kb upstream 10.0kb upstream 10000 false Chr01: 39419360-39429359 Eucalyptus grandis
Eucgr.A02402 10.0kb downstream 10.0kb downstream 16074 true Chr01: 39429360-39445433 Eucalyptus grandis
Eucgr.A02402 10.0kb downstream 10.0kb downstream 10000 false Chr01: 39435434-39445433 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067305 5270 Rosid View MSA
123750616 5271 Pentapetalae View MSA
122792134 5272 Eudicot View MSA
122042962 5273 Angiosperm View MSA
121346288 5274 Embryophyte View MSA
123424698 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.14299 0.0 23.7198    
cufflinks 1.57128 0.0 4.60819    
cufflinks 5.82936 0.0 17.9615    
cufflinks 0.937918 0.0 2.98542   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 33.3675 0.0 80.6206   High

0 Strain