Gene : Eucgr.A02414 E. grandis v2.0
Defline:  (1 of 5) PTHR12290 - CORNICHON-RELATED Genomic Order:  2168
Name:  ? Eucgr.A02414 Secondary Identifier:  ? PAC:32046282
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02414 0.5kb upstream 0.5kb upstream 4050 true Chr01: 39518812-39522861 Eucalyptus grandis
Eucgr.A02414 0.5kb upstream 0.5kb upstream 500 false Chr01: 39522362-39522861 Eucalyptus grandis
Eucgr.A02414 0.5kb downstream 0.5kb downstream 4050 true Chr01: 39518312-39522361 Eucalyptus grandis
Eucgr.A02414 0.5kb downstream 0.5kb downstream 500 false Chr01: 39518312-39518811 Eucalyptus grandis
Eucgr.A02414 1.0kb upstream 1.0kb upstream 4550 true Chr01: 39518812-39523361 Eucalyptus grandis
Eucgr.A02414 1.0kb upstream 1.0kb upstream 1000 false Chr01: 39522362-39523361 Eucalyptus grandis
Eucgr.A02414 1.0kb downstream 1.0kb downstream 4550 true Chr01: 39517812-39522361 Eucalyptus grandis
Eucgr.A02414 1.0kb downstream 1.0kb downstream 1000 false Chr01: 39517812-39518811 Eucalyptus grandis
Eucgr.A02414 2.0kb upstream 2.0kb upstream 5550 true Chr01: 39518812-39524361 Eucalyptus grandis
Eucgr.A02414 2.0kb upstream 2.0kb upstream 2000 false Chr01: 39522362-39524361 Eucalyptus grandis
Eucgr.A02414 2.0kb downstream 2.0kb downstream 5550 true Chr01: 39516812-39522361 Eucalyptus grandis
Eucgr.A02414 2.0kb downstream 2.0kb downstream 2000 false Chr01: 39516812-39518811 Eucalyptus grandis
Eucgr.A02414 5.0kb upstream 5.0kb upstream 8550 true Chr01: 39518812-39527361 Eucalyptus grandis
Eucgr.A02414 5.0kb upstream 5.0kb upstream 5000 false Chr01: 39522362-39527361 Eucalyptus grandis
Eucgr.A02414 5.0kb downstream 5.0kb downstream 8550 true Chr01: 39513812-39522361 Eucalyptus grandis
Eucgr.A02414 5.0kb downstream 5.0kb downstream 5000 false Chr01: 39513812-39518811 Eucalyptus grandis
Eucgr.A02414 10.0kb upstream 10.0kb upstream 13550 true Chr01: 39518812-39532361 Eucalyptus grandis
Eucgr.A02414 10.0kb upstream 10.0kb upstream 10000 false Chr01: 39522362-39532361 Eucalyptus grandis
Eucgr.A02414 10.0kb downstream 10.0kb downstream 13550 true Chr01: 39508812-39522361 Eucalyptus grandis
Eucgr.A02414 10.0kb downstream 10.0kb downstream 10000 false Chr01: 39508812-39518811 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067439 5270 Rosid View MSA
123752732 5271 Pentapetalae View MSA
122796851 5272 Eudicot View MSA
122045878 5273 Angiosperm View MSA
121348735 5274 Embryophyte View MSA
123427918 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.33772 0.0 15.338   Low
cufflinks 21.7652 0.0 54.1398    
cufflinks 8.64079 0.0 23.7553    
cufflinks 21.7572 0.0 54.7216    
cufflinks 19.0777 0.0 48.4869    
cufflinks 10.2286 0.0 27.49    

0 Strain