Gene : Eucgr.A02386 E. grandis v2.0
Defline:  (1 of 2) PTHR11206:SF128 - MATE EFFLUX FAMILY PROTEIN 1 Genomic Order:  2140
Name:  ? Eucgr.A02386 Secondary Identifier:  ? PAC:32048702
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02386 0.5kb upstream 0.5kb upstream 7694 true Chr01: 39305886-39313579 Eucalyptus grandis
Eucgr.A02386 0.5kb upstream 0.5kb upstream 500 false Chr01: 39313080-39313579 Eucalyptus grandis
Eucgr.A02386 0.5kb downstream 0.5kb downstream 7694 true Chr01: 39305386-39313079 Eucalyptus grandis
Eucgr.A02386 0.5kb downstream 0.5kb downstream 500 false Chr01: 39305386-39305885 Eucalyptus grandis
Eucgr.A02386 1.0kb upstream 1.0kb upstream 8194 true Chr01: 39305886-39314079 Eucalyptus grandis
Eucgr.A02386 1.0kb upstream 1.0kb upstream 1000 false Chr01: 39313080-39314079 Eucalyptus grandis
Eucgr.A02386 1.0kb downstream 1.0kb downstream 8194 true Chr01: 39304886-39313079 Eucalyptus grandis
Eucgr.A02386 1.0kb downstream 1.0kb downstream 1000 false Chr01: 39304886-39305885 Eucalyptus grandis
Eucgr.A02386 2.0kb upstream 2.0kb upstream 9194 true Chr01: 39305886-39315079 Eucalyptus grandis
Eucgr.A02386 2.0kb upstream 2.0kb upstream 2000 false Chr01: 39313080-39315079 Eucalyptus grandis
Eucgr.A02386 2.0kb downstream 2.0kb downstream 9194 true Chr01: 39303886-39313079 Eucalyptus grandis
Eucgr.A02386 2.0kb downstream 2.0kb downstream 2000 false Chr01: 39303886-39305885 Eucalyptus grandis
Eucgr.A02386 5.0kb upstream 5.0kb upstream 12194 true Chr01: 39305886-39318079 Eucalyptus grandis
Eucgr.A02386 5.0kb upstream 5.0kb upstream 5000 false Chr01: 39313080-39318079 Eucalyptus grandis
Eucgr.A02386 5.0kb downstream 5.0kb downstream 12194 true Chr01: 39300886-39313079 Eucalyptus grandis
Eucgr.A02386 5.0kb downstream 5.0kb downstream 5000 false Chr01: 39300886-39305885 Eucalyptus grandis
Eucgr.A02386 10.0kb upstream 10.0kb upstream 17194 true Chr01: 39305886-39323079 Eucalyptus grandis
Eucgr.A02386 10.0kb upstream 10.0kb upstream 10000 false Chr01: 39313080-39323079 Eucalyptus grandis
Eucgr.A02386 10.0kb downstream 10.0kb downstream 17194 true Chr01: 39295886-39313079 Eucalyptus grandis
Eucgr.A02386 10.0kb downstream 10.0kb downstream 10000 false Chr01: 39295886-39305885 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121665861 5273 Angiosperm View MSA
124052079 5270 Rosid View MSA
123620410 5271 Pentapetalae View MSA
122654815 5272 Eudicot View MSA
120937815 5274 Embryophyte View MSA
122978289 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.5307 0.0 33.1382    
cufflinks 34.0159 0.0 88.1718    
cufflinks 11.3675 0.0 31.6667    
cufflinks 20.6162 0.0 46.7109    
cufflinks 52.8473 0.0 122.612 High High
cufflinks 5.54177 0.0 18.8433   Low

0 Strain