Gene : Eucgr.A02372 E. grandis v2.0
Defline:  (1 of 2) PTHR13301//PTHR13301:SF64 - X-BOX TRANSCRIPTION FACTOR-RELATED Genomic Order:  2127
Name:  ? Eucgr.A02372 Secondary Identifier:  ? PAC:32047119
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-1001 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02372 0.5kb upstream 0.5kb upstream 4705 true Chr01: 39171840-39176544 Eucalyptus grandis
Eucgr.A02372 0.5kb upstream 0.5kb upstream 500 false Chr01: 39176045-39176544 Eucalyptus grandis
Eucgr.A02372 0.5kb downstream 0.5kb downstream 4705 true Chr01: 39171340-39176044 Eucalyptus grandis
Eucgr.A02372 0.5kb downstream 0.5kb downstream 500 false Chr01: 39171340-39171839 Eucalyptus grandis
Eucgr.A02372 1.0kb upstream 1.0kb upstream 5205 true Chr01: 39171840-39177044 Eucalyptus grandis
Eucgr.A02372 1.0kb upstream 1.0kb upstream 1000 false Chr01: 39176045-39177044 Eucalyptus grandis
Eucgr.A02372 1.0kb downstream 1.0kb downstream 5205 true Chr01: 39170840-39176044 Eucalyptus grandis
Eucgr.A02372 1.0kb downstream 1.0kb downstream 1000 false Chr01: 39170840-39171839 Eucalyptus grandis
Eucgr.A02372 2.0kb upstream 2.0kb upstream 6205 true Chr01: 39171840-39178044 Eucalyptus grandis
Eucgr.A02372 2.0kb upstream 2.0kb upstream 2000 false Chr01: 39176045-39178044 Eucalyptus grandis
Eucgr.A02372 2.0kb downstream 2.0kb downstream 6205 true Chr01: 39169840-39176044 Eucalyptus grandis
Eucgr.A02372 2.0kb downstream 2.0kb downstream 2000 false Chr01: 39169840-39171839 Eucalyptus grandis
Eucgr.A02372 5.0kb upstream 5.0kb upstream 9205 true Chr01: 39171840-39181044 Eucalyptus grandis
Eucgr.A02372 5.0kb upstream 5.0kb upstream 5000 false Chr01: 39176045-39181044 Eucalyptus grandis
Eucgr.A02372 5.0kb downstream 5.0kb downstream 9205 true Chr01: 39166840-39176044 Eucalyptus grandis
Eucgr.A02372 5.0kb downstream 5.0kb downstream 5000 false Chr01: 39166840-39171839 Eucalyptus grandis
Eucgr.A02372 10.0kb upstream 10.0kb upstream 14205 true Chr01: 39171840-39186044 Eucalyptus grandis
Eucgr.A02372 10.0kb upstream 10.0kb upstream 10000 false Chr01: 39176045-39186044 Eucalyptus grandis
Eucgr.A02372 10.0kb downstream 10.0kb downstream 14205 true Chr01: 39161840-39176044 Eucalyptus grandis
Eucgr.A02372 10.0kb downstream 10.0kb downstream 10000 false Chr01: 39161840-39171839 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073746 5270 Rosid View MSA
123746424 5271 Pentapetalae View MSA
122793475 5272 Eudicot View MSA
122046929 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.167064 0.0 0.56918 Low  
cufflinks 6.59051 0.0 15.1104   High
cufflinks 0.121024 0.0 0.429772 Low Low
cufflinks 6.58975 0.0 15.1151   High
cufflinks 1.51892 0.0 4.0028    
cufflinks 0.26449 0.0 0.850618 Low  

0 Strain