Gene : Eucgr.A02309 E. grandis v2.0
Defline:  (1 of 7) PTHR10183 - CALPAIN Genomic Order:  2072
Name:  ? Eucgr.A02309 Secondary Identifier:  ? PAC:32049085
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02309 0.5kb upstream 0.5kb upstream 7643 true Chr01: 38513031-38520673 Eucalyptus grandis
Eucgr.A02309 0.5kb upstream 0.5kb upstream 500 false Chr01: 38520174-38520673 Eucalyptus grandis
Eucgr.A02309 0.5kb downstream 0.5kb downstream 7643 true Chr01: 38512531-38520173 Eucalyptus grandis
Eucgr.A02309 0.5kb downstream 0.5kb downstream 500 false Chr01: 38512531-38513030 Eucalyptus grandis
Eucgr.A02309 1.0kb upstream 1.0kb upstream 8143 true Chr01: 38513031-38521173 Eucalyptus grandis
Eucgr.A02309 1.0kb upstream 1.0kb upstream 1000 false Chr01: 38520174-38521173 Eucalyptus grandis
Eucgr.A02309 1.0kb downstream 1.0kb downstream 8143 true Chr01: 38512031-38520173 Eucalyptus grandis
Eucgr.A02309 1.0kb downstream 1.0kb downstream 1000 false Chr01: 38512031-38513030 Eucalyptus grandis
Eucgr.A02309 2.0kb upstream 2.0kb upstream 9143 true Chr01: 38513031-38522173 Eucalyptus grandis
Eucgr.A02309 2.0kb upstream 2.0kb upstream 2000 false Chr01: 38520174-38522173 Eucalyptus grandis
Eucgr.A02309 2.0kb downstream 2.0kb downstream 9143 true Chr01: 38511031-38520173 Eucalyptus grandis
Eucgr.A02309 2.0kb downstream 2.0kb downstream 2000 false Chr01: 38511031-38513030 Eucalyptus grandis
Eucgr.A02309 5.0kb upstream 5.0kb upstream 12143 true Chr01: 38513031-38525173 Eucalyptus grandis
Eucgr.A02309 5.0kb upstream 5.0kb upstream 5000 false Chr01: 38520174-38525173 Eucalyptus grandis
Eucgr.A02309 5.0kb downstream 5.0kb downstream 12143 true Chr01: 38508031-38520173 Eucalyptus grandis
Eucgr.A02309 5.0kb downstream 5.0kb downstream 5000 false Chr01: 38508031-38513030 Eucalyptus grandis
Eucgr.A02309 10.0kb upstream 10.0kb upstream 17143 true Chr01: 38513031-38530173 Eucalyptus grandis
Eucgr.A02309 10.0kb upstream 10.0kb upstream 10000 false Chr01: 38520174-38530173 Eucalyptus grandis
Eucgr.A02309 10.0kb downstream 10.0kb downstream 17143 true Chr01: 38503031-38520173 Eucalyptus grandis
Eucgr.A02309 10.0kb downstream 10.0kb downstream 10000 false Chr01: 38503031-38513030 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064338 5270 Rosid View MSA
123744145 5271 Pentapetalae View MSA
122790435 5272 Eudicot View MSA
122044402 5273 Angiosperm View MSA
121345695 5274 Embryophyte View MSA
123427497 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 52.8519 0.0 130.192 High  
cufflinks 3.44175 0.0 9.62415   Low
cufflinks 55.0707 0.0 140.959 High  
cufflinks 3.39261 0.0 12.3048   Low
cufflinks 19.6116 0.0 55.6348    
cufflinks 29.2946 0.0 78.8576    

0 Strain