Gene : Eucgr.A02322 E. grandis v2.0
Defline:  (1 of 4) PTHR21027 - TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54 Genomic Order:  2083
Name:  ? Eucgr.A02322 Secondary Identifier:  ? PAC:32047525
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02322 0.5kb upstream 0.5kb upstream 4564 true Chr01: 38649944-38654507 Eucalyptus grandis
Eucgr.A02322 0.5kb upstream 0.5kb upstream 500 false Chr01: 38649944-38650443 Eucalyptus grandis
Eucgr.A02322 0.5kb downstream 0.5kb downstream 4564 true Chr01: 38650444-38655007 Eucalyptus grandis
Eucgr.A02322 0.5kb downstream 0.5kb downstream 500 false Chr01: 38654508-38655007 Eucalyptus grandis
Eucgr.A02322 1.0kb upstream 1.0kb upstream 5064 true Chr01: 38649444-38654507 Eucalyptus grandis
Eucgr.A02322 1.0kb upstream 1.0kb upstream 1000 false Chr01: 38649444-38650443 Eucalyptus grandis
Eucgr.A02322 1.0kb downstream 1.0kb downstream 5064 true Chr01: 38650444-38655507 Eucalyptus grandis
Eucgr.A02322 1.0kb downstream 1.0kb downstream 1000 false Chr01: 38654508-38655507 Eucalyptus grandis
Eucgr.A02322 2.0kb upstream 2.0kb upstream 6064 true Chr01: 38648444-38654507 Eucalyptus grandis
Eucgr.A02322 2.0kb upstream 2.0kb upstream 2000 false Chr01: 38648444-38650443 Eucalyptus grandis
Eucgr.A02322 2.0kb downstream 2.0kb downstream 6064 true Chr01: 38650444-38656507 Eucalyptus grandis
Eucgr.A02322 2.0kb downstream 2.0kb downstream 2000 false Chr01: 38654508-38656507 Eucalyptus grandis
Eucgr.A02322 5.0kb upstream 5.0kb upstream 9064 true Chr01: 38645444-38654507 Eucalyptus grandis
Eucgr.A02322 5.0kb upstream 5.0kb upstream 5000 false Chr01: 38645444-38650443 Eucalyptus grandis
Eucgr.A02322 5.0kb downstream 5.0kb downstream 9064 true Chr01: 38650444-38659507 Eucalyptus grandis
Eucgr.A02322 5.0kb downstream 5.0kb downstream 5000 false Chr01: 38654508-38659507 Eucalyptus grandis
Eucgr.A02322 10.0kb upstream 10.0kb upstream 14064 true Chr01: 38640444-38654507 Eucalyptus grandis
Eucgr.A02322 10.0kb upstream 10.0kb upstream 10000 false Chr01: 38640444-38650443 Eucalyptus grandis
Eucgr.A02322 10.0kb downstream 10.0kb downstream 14064 true Chr01: 38650444-38664507 Eucalyptus grandis
Eucgr.A02322 10.0kb downstream 10.0kb downstream 10000 false Chr01: 38654508-38664507 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066915 5270 Rosid View MSA
123737661 5271 Pentapetalae View MSA
122790630 5272 Eudicot View MSA
122051332 5273 Angiosperm View MSA
121351548 5274 Embryophyte View MSA
123382220 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.06892 0.0 10.3682    
cufflinks 1.2806 0.0 3.92429    
cufflinks 2.38642 0.0 6.70332    
cufflinks 0.458821 0.0 1.65763   Low
cufflinks 1.64162 0.0 4.8186    
cufflinks 3.39055 0.0 9.16558    

0 Strain