Gene : Eucgr.A02249 E. grandis v2.0
Defline:  (1 of 1) 1.4.7.1 - Glutamate synthase (ferredoxin) / Ferredoxin-dependent glutamate synthase Genomic Order:  2018
Name:  ? Eucgr.A02249 Secondary Identifier:  ? PAC:32046998
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis CITRULBIO-PWY Eucalyptus grandis pathologic  
Egrandis GLUTAMINDEG-PWY Eucalyptus grandis pathologic  
Egrandis PWY-3282 Eucalyptus grandis pathologic  
Egrandis PWY-4341 Eucalyptus grandis pathologic  
Egrandis PWY-6549 Eucalyptus grandis pathologic  
Egrandis PWY-6964 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02249 0.5kb upstream 0.5kb upstream 19750 true Chr01: 37872389-37892138 Eucalyptus grandis
Eucgr.A02249 0.5kb upstream 0.5kb upstream 500 false Chr01: 37872389-37872888 Eucalyptus grandis
Eucgr.A02249 0.5kb downstream 0.5kb downstream 19750 true Chr01: 37872889-37892638 Eucalyptus grandis
Eucgr.A02249 0.5kb downstream 0.5kb downstream 500 false Chr01: 37892139-37892638 Eucalyptus grandis
Eucgr.A02249 1.0kb upstream 1.0kb upstream 20250 true Chr01: 37871889-37892138 Eucalyptus grandis
Eucgr.A02249 1.0kb upstream 1.0kb upstream 1000 false Chr01: 37871889-37872888 Eucalyptus grandis
Eucgr.A02249 1.0kb downstream 1.0kb downstream 20250 true Chr01: 37872889-37893138 Eucalyptus grandis
Eucgr.A02249 1.0kb downstream 1.0kb downstream 1000 false Chr01: 37892139-37893138 Eucalyptus grandis
Eucgr.A02249 2.0kb upstream 2.0kb upstream 21250 true Chr01: 37870889-37892138 Eucalyptus grandis
Eucgr.A02249 2.0kb upstream 2.0kb upstream 2000 false Chr01: 37870889-37872888 Eucalyptus grandis
Eucgr.A02249 2.0kb downstream 2.0kb downstream 21250 true Chr01: 37872889-37894138 Eucalyptus grandis
Eucgr.A02249 2.0kb downstream 2.0kb downstream 2000 false Chr01: 37892139-37894138 Eucalyptus grandis
Eucgr.A02249 5.0kb upstream 5.0kb upstream 24250 true Chr01: 37867889-37892138 Eucalyptus grandis
Eucgr.A02249 5.0kb upstream 5.0kb upstream 5000 false Chr01: 37867889-37872888 Eucalyptus grandis
Eucgr.A02249 5.0kb downstream 5.0kb downstream 24250 true Chr01: 37872889-37897138 Eucalyptus grandis
Eucgr.A02249 5.0kb downstream 5.0kb downstream 5000 false Chr01: 37892139-37897138 Eucalyptus grandis
Eucgr.A02249 10.0kb upstream 10.0kb upstream 29250 true Chr01: 37862889-37892138 Eucalyptus grandis
Eucgr.A02249 10.0kb upstream 10.0kb upstream 10000 false Chr01: 37862889-37872888 Eucalyptus grandis
Eucgr.A02249 10.0kb downstream 10.0kb downstream 29250 true Chr01: 37872889-37902138 Eucalyptus grandis
Eucgr.A02249 10.0kb downstream 10.0kb downstream 10000 false Chr01: 37892139-37902138 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041031 5273 Angiosperm View MSA
124064283 5270 Rosid View MSA
123736436 5271 Pentapetalae View MSA
122793515 5272 Eudicot View MSA
121351458 5274 Embryophyte View MSA
123425051 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.5499 0.0 46.7379    
cufflinks 9.69526 0.0 22.1605    
cufflinks 13.916 0.0 32.4357    
cufflinks 13.2764 0.0 31.0319    
cufflinks 6.53971 0.0 14.666   Low
cufflinks 84.9526 0.0 276.018 High High

0 Strain