Gene : Eucgr.A02232 E. grandis v2.0
Defline:  (1 of 2) PTHR12917//PTHR12917:SF20 - ASPARTYL PROTEASE DDI-RELATED Genomic Order:  2002
Name:  ? Eucgr.A02232 Secondary Identifier:  ? PAC:32048054
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02232 0.5kb upstream 0.5kb upstream 6075 true Chr01: 37727527-37733601 Eucalyptus grandis
Eucgr.A02232 0.5kb upstream 0.5kb upstream 500 false Chr01: 37733102-37733601 Eucalyptus grandis
Eucgr.A02232 0.5kb downstream 0.5kb downstream 6075 true Chr01: 37727027-37733101 Eucalyptus grandis
Eucgr.A02232 0.5kb downstream 0.5kb downstream 500 false Chr01: 37727027-37727526 Eucalyptus grandis
Eucgr.A02232 1.0kb upstream 1.0kb upstream 6575 true Chr01: 37727527-37734101 Eucalyptus grandis
Eucgr.A02232 1.0kb upstream 1.0kb upstream 1000 false Chr01: 37733102-37734101 Eucalyptus grandis
Eucgr.A02232 1.0kb downstream 1.0kb downstream 6575 true Chr01: 37726527-37733101 Eucalyptus grandis
Eucgr.A02232 1.0kb downstream 1.0kb downstream 1000 false Chr01: 37726527-37727526 Eucalyptus grandis
Eucgr.A02232 2.0kb upstream 2.0kb upstream 7575 true Chr01: 37727527-37735101 Eucalyptus grandis
Eucgr.A02232 2.0kb upstream 2.0kb upstream 2000 false Chr01: 37733102-37735101 Eucalyptus grandis
Eucgr.A02232 2.0kb downstream 2.0kb downstream 7575 true Chr01: 37725527-37733101 Eucalyptus grandis
Eucgr.A02232 2.0kb downstream 2.0kb downstream 2000 false Chr01: 37725527-37727526 Eucalyptus grandis
Eucgr.A02232 5.0kb upstream 5.0kb upstream 10575 true Chr01: 37727527-37738101 Eucalyptus grandis
Eucgr.A02232 5.0kb upstream 5.0kb upstream 5000 false Chr01: 37733102-37738101 Eucalyptus grandis
Eucgr.A02232 5.0kb downstream 5.0kb downstream 10575 true Chr01: 37722527-37733101 Eucalyptus grandis
Eucgr.A02232 5.0kb downstream 5.0kb downstream 5000 false Chr01: 37722527-37727526 Eucalyptus grandis
Eucgr.A02232 10.0kb upstream 10.0kb upstream 15575 true Chr01: 37727527-37743101 Eucalyptus grandis
Eucgr.A02232 10.0kb upstream 10.0kb upstream 10000 false Chr01: 37733102-37743101 Eucalyptus grandis
Eucgr.A02232 10.0kb downstream 10.0kb downstream 15575 true Chr01: 37717527-37733101 Eucalyptus grandis
Eucgr.A02232 10.0kb downstream 10.0kb downstream 10000 false Chr01: 37717527-37727526 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061848 5270 Rosid View MSA
123737894 5271 Pentapetalae View MSA
122788479 5272 Eudicot View MSA
122046571 5273 Angiosperm View MSA
121349564 5274 Embryophyte View MSA
123424365 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.962 0.0 50.0227    
cufflinks 29.0324 0.0 65.01    
cufflinks 18.0623 0.0 41.7911    
cufflinks 55.1832 0.0 122.044 High High
cufflinks 48.9688 0.0 108.378 High High
cufflinks 18.4773 0.0 42.5779    

0 Strain