Gene : Eucgr.A02198 E. grandis v2.0
Defline:  (1 of 1) PTHR12702//PTHR12702:SF4 - SEC15 Genomic Order:  1978
Name:  ? Eucgr.A02198 Secondary Identifier:  ? PAC:32048185
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02198 0.5kb upstream 0.5kb upstream 2870 true Chr01: 37359522-37362391 Eucalyptus grandis
Eucgr.A02198 0.5kb upstream 0.5kb upstream 500 false Chr01: 37361892-37362391 Eucalyptus grandis
Eucgr.A02198 0.5kb downstream 0.5kb downstream 2870 true Chr01: 37359022-37361891 Eucalyptus grandis
Eucgr.A02198 0.5kb downstream 0.5kb downstream 500 false Chr01: 37359022-37359521 Eucalyptus grandis
Eucgr.A02198 1.0kb upstream 1.0kb upstream 3370 true Chr01: 37359522-37362891 Eucalyptus grandis
Eucgr.A02198 1.0kb upstream 1.0kb upstream 1000 false Chr01: 37361892-37362891 Eucalyptus grandis
Eucgr.A02198 1.0kb downstream 1.0kb downstream 3370 true Chr01: 37358522-37361891 Eucalyptus grandis
Eucgr.A02198 1.0kb downstream 1.0kb downstream 1000 false Chr01: 37358522-37359521 Eucalyptus grandis
Eucgr.A02198 2.0kb upstream 2.0kb upstream 4370 true Chr01: 37359522-37363891 Eucalyptus grandis
Eucgr.A02198 2.0kb upstream 2.0kb upstream 2000 false Chr01: 37361892-37363891 Eucalyptus grandis
Eucgr.A02198 2.0kb downstream 2.0kb downstream 4370 true Chr01: 37357522-37361891 Eucalyptus grandis
Eucgr.A02198 2.0kb downstream 2.0kb downstream 2000 false Chr01: 37357522-37359521 Eucalyptus grandis
Eucgr.A02198 5.0kb upstream 5.0kb upstream 7370 true Chr01: 37359522-37366891 Eucalyptus grandis
Eucgr.A02198 5.0kb upstream 5.0kb upstream 5000 false Chr01: 37361892-37366891 Eucalyptus grandis
Eucgr.A02198 5.0kb downstream 5.0kb downstream 7370 true Chr01: 37354522-37361891 Eucalyptus grandis
Eucgr.A02198 5.0kb downstream 5.0kb downstream 5000 false Chr01: 37354522-37359521 Eucalyptus grandis
Eucgr.A02198 10.0kb upstream 10.0kb upstream 12370 true Chr01: 37359522-37371891 Eucalyptus grandis
Eucgr.A02198 10.0kb upstream 10.0kb upstream 10000 false Chr01: 37361892-37371891 Eucalyptus grandis
Eucgr.A02198 10.0kb downstream 10.0kb downstream 12370 true Chr01: 37349522-37361891 Eucalyptus grandis
Eucgr.A02198 10.0kb downstream 10.0kb downstream 10000 false Chr01: 37349522-37359521 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063470 5270 Rosid View MSA
123747184 5271 Pentapetalae View MSA
122789290 5272 Eudicot View MSA
122044095 5273 Angiosperm View MSA
121349214 5274 Embryophyte View MSA
123424246 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.75568 0.0 11.3521   Low
cufflinks 12.9341 0.0 28.7713   High
cufflinks 6.4056 0.0 14.8285    
cufflinks 12.971 0.0 28.8396   High
cufflinks 7.04277 0.0 16.1892    
cufflinks 5.31236 0.0 12.6485    

0 Strain