Gene : Eucgr.A02196 E. grandis v2.0
Defline:  (1 of 2) PTHR24006:SF526 - UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 10-RELATED Genomic Order:  1976
Name:  ? Eucgr.A02196 Secondary Identifier:  ? PAC:32048943
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02196 0.5kb upstream 0.5kb upstream 9200 true Chr01: 37337842-37347041 Eucalyptus grandis
Eucgr.A02196 0.5kb upstream 0.5kb upstream 500 false Chr01: 37346542-37347041 Eucalyptus grandis
Eucgr.A02196 0.5kb downstream 0.5kb downstream 9200 true Chr01: 37337342-37346541 Eucalyptus grandis
Eucgr.A02196 0.5kb downstream 0.5kb downstream 500 false Chr01: 37337342-37337841 Eucalyptus grandis
Eucgr.A02196 1.0kb upstream 1.0kb upstream 9700 true Chr01: 37337842-37347541 Eucalyptus grandis
Eucgr.A02196 1.0kb upstream 1.0kb upstream 1000 false Chr01: 37346542-37347541 Eucalyptus grandis
Eucgr.A02196 1.0kb downstream 1.0kb downstream 9700 true Chr01: 37336842-37346541 Eucalyptus grandis
Eucgr.A02196 1.0kb downstream 1.0kb downstream 1000 false Chr01: 37336842-37337841 Eucalyptus grandis
Eucgr.A02196 2.0kb upstream 2.0kb upstream 10700 true Chr01: 37337842-37348541 Eucalyptus grandis
Eucgr.A02196 2.0kb upstream 2.0kb upstream 2000 false Chr01: 37346542-37348541 Eucalyptus grandis
Eucgr.A02196 2.0kb downstream 2.0kb downstream 10700 true Chr01: 37335842-37346541 Eucalyptus grandis
Eucgr.A02196 2.0kb downstream 2.0kb downstream 2000 false Chr01: 37335842-37337841 Eucalyptus grandis
Eucgr.A02196 5.0kb upstream 5.0kb upstream 13700 true Chr01: 37337842-37351541 Eucalyptus grandis
Eucgr.A02196 5.0kb upstream 5.0kb upstream 5000 false Chr01: 37346542-37351541 Eucalyptus grandis
Eucgr.A02196 5.0kb downstream 5.0kb downstream 13700 true Chr01: 37332842-37346541 Eucalyptus grandis
Eucgr.A02196 5.0kb downstream 5.0kb downstream 5000 false Chr01: 37332842-37337841 Eucalyptus grandis
Eucgr.A02196 10.0kb upstream 10.0kb upstream 18700 true Chr01: 37337842-37356541 Eucalyptus grandis
Eucgr.A02196 10.0kb upstream 10.0kb upstream 10000 false Chr01: 37346542-37356541 Eucalyptus grandis
Eucgr.A02196 10.0kb downstream 10.0kb downstream 18700 true Chr01: 37327842-37346541 Eucalyptus grandis
Eucgr.A02196 10.0kb downstream 10.0kb downstream 10000 false Chr01: 37327842-37337841 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064988 5270 Rosid View MSA
123740108 5271 Pentapetalae View MSA
122790123 5272 Eudicot View MSA
122043938 5273 Angiosperm View MSA
121310212 5274 Embryophyte View MSA
123426305 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.18462 0.0 20.5759    
cufflinks 3.47374 0.0 8.32451   Low
cufflinks 12.3089 0.0 27.3111    
cufflinks 8.08216 0.0 18.159    
cufflinks 3.62412 0.0 8.66198   Low
cufflinks 14.2476 0.0 31.5662   High

0 Strain