Gene : Eucgr.A02172 E. grandis v2.0
Defline:  (1 of 1) PTHR12838 - U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 11 Genomic Order:  1952
Name:  ? Eucgr.A02172 Secondary Identifier:  ? PAC:32046297
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02172 0.5kb upstream 0.5kb upstream 3083 true Chr01: 37050359-37053441 Eucalyptus grandis
Eucgr.A02172 0.5kb upstream 0.5kb upstream 500 false Chr01: 37050359-37050858 Eucalyptus grandis
Eucgr.A02172 0.5kb downstream 0.5kb downstream 3083 true Chr01: 37050859-37053941 Eucalyptus grandis
Eucgr.A02172 0.5kb downstream 0.5kb downstream 500 false Chr01: 37053442-37053941 Eucalyptus grandis
Eucgr.A02172 1.0kb upstream 1.0kb upstream 3583 true Chr01: 37049859-37053441 Eucalyptus grandis
Eucgr.A02172 1.0kb upstream 1.0kb upstream 1000 false Chr01: 37049859-37050858 Eucalyptus grandis
Eucgr.A02172 1.0kb downstream 1.0kb downstream 3583 true Chr01: 37050859-37054441 Eucalyptus grandis
Eucgr.A02172 1.0kb downstream 1.0kb downstream 1000 false Chr01: 37053442-37054441 Eucalyptus grandis
Eucgr.A02172 2.0kb upstream 2.0kb upstream 4583 true Chr01: 37048859-37053441 Eucalyptus grandis
Eucgr.A02172 2.0kb upstream 2.0kb upstream 2000 false Chr01: 37048859-37050858 Eucalyptus grandis
Eucgr.A02172 2.0kb downstream 2.0kb downstream 4583 true Chr01: 37050859-37055441 Eucalyptus grandis
Eucgr.A02172 2.0kb downstream 2.0kb downstream 2000 false Chr01: 37053442-37055441 Eucalyptus grandis
Eucgr.A02172 5.0kb upstream 5.0kb upstream 7583 true Chr01: 37045859-37053441 Eucalyptus grandis
Eucgr.A02172 5.0kb upstream 5.0kb upstream 5000 false Chr01: 37045859-37050858 Eucalyptus grandis
Eucgr.A02172 5.0kb downstream 5.0kb downstream 7583 true Chr01: 37050859-37058441 Eucalyptus grandis
Eucgr.A02172 5.0kb downstream 5.0kb downstream 5000 false Chr01: 37053442-37058441 Eucalyptus grandis
Eucgr.A02172 10.0kb upstream 10.0kb upstream 12583 true Chr01: 37040859-37053441 Eucalyptus grandis
Eucgr.A02172 10.0kb upstream 10.0kb upstream 10000 false Chr01: 37040859-37050858 Eucalyptus grandis
Eucgr.A02172 10.0kb downstream 10.0kb downstream 12583 true Chr01: 37050859-37063441 Eucalyptus grandis
Eucgr.A02172 10.0kb downstream 10.0kb downstream 10000 false Chr01: 37053442-37063441 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026243 5273 Angiosperm View MSA
124062560 5270 Rosid View MSA
123737231 5271 Pentapetalae View MSA
122787180 5272 Eudicot View MSA
121350042 5274 Embryophyte View MSA
123425029 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.9563 0.0 27.9724   High
cufflinks 4.02207 0.0 11.1029   Low
cufflinks 7.60327 0.0 25.6131    
cufflinks 10.1307 0.0 24.067    
cufflinks 7.45089 0.0 18.5766    
cufflinks 9.9477 0.0 30.4009    

0 Strain