Gene : Eucgr.A02173 E. grandis v2.0
Defline:  (1 of 2) 1.1.99.2 - L-2-hydroxyglutarate dehydrogenase / L-alpha-hydroxyglutarate dehydrogenase Genomic Order:  1953
Name:  ? Eucgr.A02173 Secondary Identifier:  ? PAC:32049238
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02173 0.5kb upstream 0.5kb upstream 4251 true Chr01: 37053792-37058042 Eucalyptus grandis
Eucgr.A02173 0.5kb upstream 0.5kb upstream 500 false Chr01: 37057543-37058042 Eucalyptus grandis
Eucgr.A02173 0.5kb downstream 0.5kb downstream 4251 true Chr01: 37053292-37057542 Eucalyptus grandis
Eucgr.A02173 0.5kb downstream 0.5kb downstream 500 false Chr01: 37053292-37053791 Eucalyptus grandis
Eucgr.A02173 1.0kb upstream 1.0kb upstream 4751 true Chr01: 37053792-37058542 Eucalyptus grandis
Eucgr.A02173 1.0kb upstream 1.0kb upstream 1000 false Chr01: 37057543-37058542 Eucalyptus grandis
Eucgr.A02173 1.0kb downstream 1.0kb downstream 4751 true Chr01: 37052792-37057542 Eucalyptus grandis
Eucgr.A02173 1.0kb downstream 1.0kb downstream 1000 false Chr01: 37052792-37053791 Eucalyptus grandis
Eucgr.A02173 2.0kb upstream 2.0kb upstream 5751 true Chr01: 37053792-37059542 Eucalyptus grandis
Eucgr.A02173 2.0kb upstream 2.0kb upstream 2000 false Chr01: 37057543-37059542 Eucalyptus grandis
Eucgr.A02173 2.0kb downstream 2.0kb downstream 5751 true Chr01: 37051792-37057542 Eucalyptus grandis
Eucgr.A02173 2.0kb downstream 2.0kb downstream 2000 false Chr01: 37051792-37053791 Eucalyptus grandis
Eucgr.A02173 5.0kb upstream 5.0kb upstream 8751 true Chr01: 37053792-37062542 Eucalyptus grandis
Eucgr.A02173 5.0kb upstream 5.0kb upstream 5000 false Chr01: 37057543-37062542 Eucalyptus grandis
Eucgr.A02173 5.0kb downstream 5.0kb downstream 8751 true Chr01: 37048792-37057542 Eucalyptus grandis
Eucgr.A02173 5.0kb downstream 5.0kb downstream 5000 false Chr01: 37048792-37053791 Eucalyptus grandis
Eucgr.A02173 10.0kb upstream 10.0kb upstream 13751 true Chr01: 37053792-37067542 Eucalyptus grandis
Eucgr.A02173 10.0kb upstream 10.0kb upstream 10000 false Chr01: 37057543-37067542 Eucalyptus grandis
Eucgr.A02173 10.0kb downstream 10.0kb downstream 13751 true Chr01: 37043792-37057542 Eucalyptus grandis
Eucgr.A02173 10.0kb downstream 10.0kb downstream 10000 false Chr01: 37043792-37053791 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061450 5270 Rosid View MSA
123738460 5271 Pentapetalae View MSA
122792382 5272 Eudicot View MSA
122042852 5273 Angiosperm View MSA
121347258 5274 Embryophyte View MSA
123427019 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.7335 0.0 11.8733    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.74869 0.0 14.1507    
cufflinks 0.570053 0.0 1.78631   Low
cufflinks 1.59539 0.0 4.4565    
cufflinks 4.54704 0.0 11.4119    

0 Strain