Gene : Eucgr.A02175 E. grandis v2.0
Defline:  (1 of 1) PTHR22778//PTHR22778:SF22 - OVARIAN CANCER GENE-2 PROTEIN-RELATED Genomic Order:  1955
Name:  ? Eucgr.A02175 Secondary Identifier:  ? PAC:32047308
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-3841 Eucalyptus grandis pathologic  
Egrandis PWY-6612 Eucalyptus grandis pathologic  
Egrandis PWY-6614 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02175 0.5kb upstream 0.5kb upstream 3126 true Chr01: 37066880-37070005 Eucalyptus grandis
Eucgr.A02175 0.5kb upstream 0.5kb upstream 500 false Chr01: 37066880-37067379 Eucalyptus grandis
Eucgr.A02175 0.5kb downstream 0.5kb downstream 3126 true Chr01: 37067380-37070505 Eucalyptus grandis
Eucgr.A02175 0.5kb downstream 0.5kb downstream 500 false Chr01: 37070006-37070505 Eucalyptus grandis
Eucgr.A02175 1.0kb upstream 1.0kb upstream 3626 true Chr01: 37066380-37070005 Eucalyptus grandis
Eucgr.A02175 1.0kb upstream 1.0kb upstream 1000 false Chr01: 37066380-37067379 Eucalyptus grandis
Eucgr.A02175 1.0kb downstream 1.0kb downstream 3626 true Chr01: 37067380-37071005 Eucalyptus grandis
Eucgr.A02175 1.0kb downstream 1.0kb downstream 1000 false Chr01: 37070006-37071005 Eucalyptus grandis
Eucgr.A02175 2.0kb upstream 2.0kb upstream 4626 true Chr01: 37065380-37070005 Eucalyptus grandis
Eucgr.A02175 2.0kb upstream 2.0kb upstream 2000 false Chr01: 37065380-37067379 Eucalyptus grandis
Eucgr.A02175 2.0kb downstream 2.0kb downstream 4626 true Chr01: 37067380-37072005 Eucalyptus grandis
Eucgr.A02175 2.0kb downstream 2.0kb downstream 2000 false Chr01: 37070006-37072005 Eucalyptus grandis
Eucgr.A02175 5.0kb upstream 5.0kb upstream 7626 true Chr01: 37062380-37070005 Eucalyptus grandis
Eucgr.A02175 5.0kb upstream 5.0kb upstream 5000 false Chr01: 37062380-37067379 Eucalyptus grandis
Eucgr.A02175 5.0kb downstream 5.0kb downstream 7626 true Chr01: 37067380-37075005 Eucalyptus grandis
Eucgr.A02175 5.0kb downstream 5.0kb downstream 5000 false Chr01: 37070006-37075005 Eucalyptus grandis
Eucgr.A02175 10.0kb upstream 10.0kb upstream 12626 true Chr01: 37057380-37070005 Eucalyptus grandis
Eucgr.A02175 10.0kb upstream 10.0kb upstream 10000 false Chr01: 37057380-37067379 Eucalyptus grandis
Eucgr.A02175 10.0kb downstream 10.0kb downstream 12626 true Chr01: 37067380-37080005 Eucalyptus grandis
Eucgr.A02175 10.0kb downstream 10.0kb downstream 10000 false Chr01: 37070006-37080005 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070831 5270 Rosid View MSA
123747932 5271 Pentapetalae View MSA
122794678 5272 Eudicot View MSA
122048467 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121348869 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.21293 0.0 15.5865    
cufflinks 23.9449 0.0 54.6294   High
cufflinks 7.62773 0.0 18.6335    
cufflinks 13.2596 0.0 30.524    
cufflinks 8.5059 0.0 20.3347    
cufflinks 3.77824 0.0 10.3745   Low

0 Strain