Gene : Eucgr.A02177 E. grandis v2.0
Defline:  (1 of 1) 1.14.13.81 - Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase / Mg-protoporphyrin IX monomethyl ester oxidative cyclase Genomic Order:  1957
Name:  ? Eucgr.A02177 Secondary Identifier:  ? PAC:32048770
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis CHLOROPHYLL-SYN Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02177 0.5kb upstream 0.5kb upstream 2902 true Chr01: 37073878-37076779 Eucalyptus grandis
Eucgr.A02177 0.5kb upstream 0.5kb upstream 500 false Chr01: 37076280-37076779 Eucalyptus grandis
Eucgr.A02177 0.5kb downstream 0.5kb downstream 2902 true Chr01: 37073378-37076279 Eucalyptus grandis
Eucgr.A02177 0.5kb downstream 0.5kb downstream 500 false Chr01: 37073378-37073877 Eucalyptus grandis
Eucgr.A02177 1.0kb upstream 1.0kb upstream 3402 true Chr01: 37073878-37077279 Eucalyptus grandis
Eucgr.A02177 1.0kb upstream 1.0kb upstream 1000 false Chr01: 37076280-37077279 Eucalyptus grandis
Eucgr.A02177 1.0kb downstream 1.0kb downstream 3402 true Chr01: 37072878-37076279 Eucalyptus grandis
Eucgr.A02177 1.0kb downstream 1.0kb downstream 1000 false Chr01: 37072878-37073877 Eucalyptus grandis
Eucgr.A02177 2.0kb upstream 2.0kb upstream 4402 true Chr01: 37073878-37078279 Eucalyptus grandis
Eucgr.A02177 2.0kb upstream 2.0kb upstream 2000 false Chr01: 37076280-37078279 Eucalyptus grandis
Eucgr.A02177 2.0kb downstream 2.0kb downstream 4402 true Chr01: 37071878-37076279 Eucalyptus grandis
Eucgr.A02177 2.0kb downstream 2.0kb downstream 2000 false Chr01: 37071878-37073877 Eucalyptus grandis
Eucgr.A02177 5.0kb upstream 5.0kb upstream 7402 true Chr01: 37073878-37081279 Eucalyptus grandis
Eucgr.A02177 5.0kb upstream 5.0kb upstream 5000 false Chr01: 37076280-37081279 Eucalyptus grandis
Eucgr.A02177 5.0kb downstream 5.0kb downstream 7402 true Chr01: 37068878-37076279 Eucalyptus grandis
Eucgr.A02177 5.0kb downstream 5.0kb downstream 5000 false Chr01: 37068878-37073877 Eucalyptus grandis
Eucgr.A02177 10.0kb upstream 10.0kb upstream 12402 true Chr01: 37073878-37086279 Eucalyptus grandis
Eucgr.A02177 10.0kb upstream 10.0kb upstream 10000 false Chr01: 37076280-37086279 Eucalyptus grandis
Eucgr.A02177 10.0kb downstream 10.0kb downstream 12402 true Chr01: 37063878-37076279 Eucalyptus grandis
Eucgr.A02177 10.0kb downstream 10.0kb downstream 10000 false Chr01: 37063878-37073877 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064465 5270 Rosid View MSA
123737213 5271 Pentapetalae View MSA
122789972 5272 Eudicot View MSA
122044823 5273 Angiosperm View MSA
121345959 5274 Embryophyte View MSA
123424479 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 84.7699 0.0 242.014 High  
cufflinks 37.02 0.0 87.0533    
cufflinks 43.8212 0.0 108.256 High  
cufflinks 2.761 0.0 7.65425   Low
cufflinks 2.05913 0.0 5.911   Low
cufflinks 239.25 0.0 709.574 High High

0 Strain