Gene : Eucgr.A02909 E. grandis v2.0
Defline:  (1 of 5) PTHR23500:SF30 - SUGAR TRANSPORT PROTEIN 3 Genomic Order:  2617
Name:  ? Eucgr.A02909 Secondary Identifier:  ? PAC:32047729
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02909 0.5kb upstream 0.5kb upstream 2386 true Chr01: 44164319-44166704 Eucalyptus grandis
Eucgr.A02909 0.5kb upstream 0.5kb upstream 500 false Chr01: 44164319-44164818 Eucalyptus grandis
Eucgr.A02909 0.5kb downstream 0.5kb downstream 2386 true Chr01: 44164819-44167204 Eucalyptus grandis
Eucgr.A02909 0.5kb downstream 0.5kb downstream 500 false Chr01: 44166705-44167204 Eucalyptus grandis
Eucgr.A02909 1.0kb upstream 1.0kb upstream 2886 true Chr01: 44163819-44166704 Eucalyptus grandis
Eucgr.A02909 1.0kb upstream 1.0kb upstream 1000 false Chr01: 44163819-44164818 Eucalyptus grandis
Eucgr.A02909 1.0kb downstream 1.0kb downstream 2886 true Chr01: 44164819-44167704 Eucalyptus grandis
Eucgr.A02909 1.0kb downstream 1.0kb downstream 1000 false Chr01: 44166705-44167704 Eucalyptus grandis
Eucgr.A02909 2.0kb upstream 2.0kb upstream 3886 true Chr01: 44162819-44166704 Eucalyptus grandis
Eucgr.A02909 2.0kb upstream 2.0kb upstream 2000 false Chr01: 44162819-44164818 Eucalyptus grandis
Eucgr.A02909 2.0kb downstream 2.0kb downstream 3886 true Chr01: 44164819-44168704 Eucalyptus grandis
Eucgr.A02909 2.0kb downstream 2.0kb downstream 2000 false Chr01: 44166705-44168704 Eucalyptus grandis
Eucgr.A02909 5.0kb upstream 5.0kb upstream 6886 true Chr01: 44159819-44166704 Eucalyptus grandis
Eucgr.A02909 5.0kb upstream 5.0kb upstream 5000 false Chr01: 44159819-44164818 Eucalyptus grandis
Eucgr.A02909 5.0kb downstream 5.0kb downstream 6886 true Chr01: 44164819-44171704 Eucalyptus grandis
Eucgr.A02909 5.0kb downstream 5.0kb downstream 5000 false Chr01: 44166705-44171704 Eucalyptus grandis
Eucgr.A02909 10.0kb upstream 10.0kb upstream 11886 true Chr01: 44154819-44166704 Eucalyptus grandis
Eucgr.A02909 10.0kb upstream 10.0kb upstream 10000 false Chr01: 44154819-44164818 Eucalyptus grandis
Eucgr.A02909 10.0kb downstream 10.0kb downstream 11886 true Chr01: 44164819-44176704 Eucalyptus grandis
Eucgr.A02909 10.0kb downstream 10.0kb downstream 10000 false Chr01: 44166705-44176704 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069409 5270 Rosid View MSA
123753403 5271 Pentapetalae View MSA
122797213 5272 Eudicot View MSA
122051255 5273 Angiosperm View MSA
123429172 5275 Viridiplantae View MSA
121350723 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.81362 0.0 12.5421    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.47778 0.0 11.851    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.16707 0.0 4.03011   Low

0 Strain