Gene : Eucgr.A02719 E. grandis v2.0
Defline:  (1 of 3) PF04278 - Tic22-like family (Tic22) Genomic Order:  2438
Name:  ? Eucgr.A02719 Secondary Identifier:  ? PAC:32047842
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02719 0.5kb upstream 0.5kb upstream 5015 true Chr01: 42477398-42482412 Eucalyptus grandis
Eucgr.A02719 0.5kb upstream 0.5kb upstream 500 false Chr01: 42481913-42482412 Eucalyptus grandis
Eucgr.A02719 0.5kb downstream 0.5kb downstream 5015 true Chr01: 42476898-42481912 Eucalyptus grandis
Eucgr.A02719 0.5kb downstream 0.5kb downstream 500 false Chr01: 42476898-42477397 Eucalyptus grandis
Eucgr.A02719 1.0kb upstream 1.0kb upstream 5515 true Chr01: 42477398-42482912 Eucalyptus grandis
Eucgr.A02719 1.0kb upstream 1.0kb upstream 1000 false Chr01: 42481913-42482912 Eucalyptus grandis
Eucgr.A02719 1.0kb downstream 1.0kb downstream 5515 true Chr01: 42476398-42481912 Eucalyptus grandis
Eucgr.A02719 1.0kb downstream 1.0kb downstream 1000 false Chr01: 42476398-42477397 Eucalyptus grandis
Eucgr.A02719 2.0kb upstream 2.0kb upstream 6515 true Chr01: 42477398-42483912 Eucalyptus grandis
Eucgr.A02719 2.0kb upstream 2.0kb upstream 2000 false Chr01: 42481913-42483912 Eucalyptus grandis
Eucgr.A02719 2.0kb downstream 2.0kb downstream 6515 true Chr01: 42475398-42481912 Eucalyptus grandis
Eucgr.A02719 2.0kb downstream 2.0kb downstream 2000 false Chr01: 42475398-42477397 Eucalyptus grandis
Eucgr.A02719 5.0kb upstream 5.0kb upstream 9515 true Chr01: 42477398-42486912 Eucalyptus grandis
Eucgr.A02719 5.0kb upstream 5.0kb upstream 5000 false Chr01: 42481913-42486912 Eucalyptus grandis
Eucgr.A02719 5.0kb downstream 5.0kb downstream 9515 true Chr01: 42472398-42481912 Eucalyptus grandis
Eucgr.A02719 5.0kb downstream 5.0kb downstream 5000 false Chr01: 42472398-42477397 Eucalyptus grandis
Eucgr.A02719 10.0kb upstream 10.0kb upstream 14515 true Chr01: 42477398-42491912 Eucalyptus grandis
Eucgr.A02719 10.0kb upstream 10.0kb upstream 10000 false Chr01: 42481913-42491912 Eucalyptus grandis
Eucgr.A02719 10.0kb downstream 10.0kb downstream 14515 true Chr01: 42467398-42481912 Eucalyptus grandis
Eucgr.A02719 10.0kb downstream 10.0kb downstream 10000 false Chr01: 42467398-42477397 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063444 5270 Rosid View MSA
123744483 5271 Pentapetalae View MSA
122790475 5272 Eudicot View MSA
122047380 5273 Angiosperm View MSA
121344233 5274 Embryophyte View MSA
123380010 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.176 0.0 28.8554   Low
cufflinks 16.233 0.0 42.2421    
cufflinks 14.8095 0.0 38.705    
cufflinks 28.6237 0.0 79.0947   High
cufflinks 31.7108 0.0 71.8475   High
cufflinks 16.7734 0.0 40.186    

0 Strain