Gene : Eucgr.A02721 E. grandis v2.0
Defline:  (1 of 1) PTHR13343:SF13 - PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN-LIKE PROTEIN Genomic Order:  2440
Name:  ? Eucgr.A02721 Secondary Identifier:  ? PAC:32047096
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02721 0.5kb upstream 0.5kb upstream 5797 true Chr01: 42489992-42495788 Eucalyptus grandis
Eucgr.A02721 0.5kb upstream 0.5kb upstream 500 false Chr01: 42489992-42490491 Eucalyptus grandis
Eucgr.A02721 0.5kb downstream 0.5kb downstream 5797 true Chr01: 42490492-42496288 Eucalyptus grandis
Eucgr.A02721 0.5kb downstream 0.5kb downstream 500 false Chr01: 42495789-42496288 Eucalyptus grandis
Eucgr.A02721 1.0kb upstream 1.0kb upstream 6297 true Chr01: 42489492-42495788 Eucalyptus grandis
Eucgr.A02721 1.0kb upstream 1.0kb upstream 1000 false Chr01: 42489492-42490491 Eucalyptus grandis
Eucgr.A02721 1.0kb downstream 1.0kb downstream 6297 true Chr01: 42490492-42496788 Eucalyptus grandis
Eucgr.A02721 1.0kb downstream 1.0kb downstream 1000 false Chr01: 42495789-42496788 Eucalyptus grandis
Eucgr.A02721 2.0kb upstream 2.0kb upstream 7297 true Chr01: 42488492-42495788 Eucalyptus grandis
Eucgr.A02721 2.0kb upstream 2.0kb upstream 2000 false Chr01: 42488492-42490491 Eucalyptus grandis
Eucgr.A02721 2.0kb downstream 2.0kb downstream 7297 true Chr01: 42490492-42497788 Eucalyptus grandis
Eucgr.A02721 2.0kb downstream 2.0kb downstream 2000 false Chr01: 42495789-42497788 Eucalyptus grandis
Eucgr.A02721 5.0kb upstream 5.0kb upstream 10297 true Chr01: 42485492-42495788 Eucalyptus grandis
Eucgr.A02721 5.0kb upstream 5.0kb upstream 5000 false Chr01: 42485492-42490491 Eucalyptus grandis
Eucgr.A02721 5.0kb downstream 5.0kb downstream 10297 true Chr01: 42490492-42500788 Eucalyptus grandis
Eucgr.A02721 5.0kb downstream 5.0kb downstream 5000 false Chr01: 42495789-42500788 Eucalyptus grandis
Eucgr.A02721 10.0kb upstream 10.0kb upstream 15297 true Chr01: 42480492-42495788 Eucalyptus grandis
Eucgr.A02721 10.0kb upstream 10.0kb upstream 10000 false Chr01: 42480492-42490491 Eucalyptus grandis
Eucgr.A02721 10.0kb downstream 10.0kb downstream 15297 true Chr01: 42490492-42505788 Eucalyptus grandis
Eucgr.A02721 10.0kb downstream 10.0kb downstream 10000 false Chr01: 42495789-42505788 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066138 5270 Rosid View MSA
123741710 5271 Pentapetalae View MSA
122789997 5272 Eudicot View MSA
122050575 5273 Angiosperm View MSA
121348228 5274 Embryophyte View MSA
123380781 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.3 0.0 12.6995    
cufflinks 0.651713 0.0 1.92858 Low Low
cufflinks 2.20218 0.0 5.75441    
cufflinks 1.66601 0.0 4.46013    
cufflinks 1.12961 0.0 3.1554    
cufflinks 10.755 0.0 24.3738   High

0 Strain