Gene : Eucgr.A02743 E. grandis v2.0
Defline:  (1 of 1) PTHR13696:SF1 - SEPTUM SITE-DETERMINING PROTEIN MIND HOMOLOG, CHLOROPLASTIC-RELATED Genomic Order:  2460
Name:  ? Eucgr.A02743 Secondary Identifier:  ? PAC:32049143
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02743 0.5kb upstream 0.5kb upstream 2303 true Chr01: 42629425-42631727 Eucalyptus grandis
Eucgr.A02743 0.5kb upstream 0.5kb upstream 500 false Chr01: 42631228-42631727 Eucalyptus grandis
Eucgr.A02743 0.5kb downstream 0.5kb downstream 2303 true Chr01: 42628925-42631227 Eucalyptus grandis
Eucgr.A02743 0.5kb downstream 0.5kb downstream 500 false Chr01: 42628925-42629424 Eucalyptus grandis
Eucgr.A02743 1.0kb upstream 1.0kb upstream 2803 true Chr01: 42629425-42632227 Eucalyptus grandis
Eucgr.A02743 1.0kb upstream 1.0kb upstream 1000 false Chr01: 42631228-42632227 Eucalyptus grandis
Eucgr.A02743 1.0kb downstream 1.0kb downstream 2803 true Chr01: 42628425-42631227 Eucalyptus grandis
Eucgr.A02743 1.0kb downstream 1.0kb downstream 1000 false Chr01: 42628425-42629424 Eucalyptus grandis
Eucgr.A02743 2.0kb upstream 2.0kb upstream 3803 true Chr01: 42629425-42633227 Eucalyptus grandis
Eucgr.A02743 2.0kb upstream 2.0kb upstream 2000 false Chr01: 42631228-42633227 Eucalyptus grandis
Eucgr.A02743 2.0kb downstream 2.0kb downstream 3803 true Chr01: 42627425-42631227 Eucalyptus grandis
Eucgr.A02743 2.0kb downstream 2.0kb downstream 2000 false Chr01: 42627425-42629424 Eucalyptus grandis
Eucgr.A02743 5.0kb upstream 5.0kb upstream 6803 true Chr01: 42629425-42636227 Eucalyptus grandis
Eucgr.A02743 5.0kb upstream 5.0kb upstream 5000 false Chr01: 42631228-42636227 Eucalyptus grandis
Eucgr.A02743 5.0kb downstream 5.0kb downstream 6803 true Chr01: 42624425-42631227 Eucalyptus grandis
Eucgr.A02743 5.0kb downstream 5.0kb downstream 5000 false Chr01: 42624425-42629424 Eucalyptus grandis
Eucgr.A02743 10.0kb upstream 10.0kb upstream 11803 true Chr01: 42629425-42641227 Eucalyptus grandis
Eucgr.A02743 10.0kb upstream 10.0kb upstream 10000 false Chr01: 42631228-42641227 Eucalyptus grandis
Eucgr.A02743 10.0kb downstream 10.0kb downstream 11803 true Chr01: 42619425-42631227 Eucalyptus grandis
Eucgr.A02743 10.0kb downstream 10.0kb downstream 10000 false Chr01: 42619425-42629424 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063209 5270 Rosid View MSA
123737369 5271 Pentapetalae View MSA
122788241 5272 Eudicot View MSA
122045379 5273 Angiosperm View MSA
121344611 5274 Embryophyte View MSA
123425268 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.24959 0.0 15.0661    
cufflinks 5.60137 0.0 13.5985    
cufflinks 3.5939 0.0 9.16036    
cufflinks 2.94234 0.0 7.61826   Low
cufflinks 5.69564 0.0 13.856    
cufflinks 11.5106 0.0 26.376   High

0 Strain