Gene : Eucgr.A02654 E. grandis v2.0
Defline:  (1 of 2) 2.7.8.7 - Holo-[acyl-carrier-protein] synthase / PPTase Genomic Order:  2381
Name:  ? Eucgr.A02654 Secondary Identifier:  ? PAC:32048384
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6012-1 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02654 0.5kb upstream 0.5kb upstream 4007 true Chr01: 41838892-41842898 Eucalyptus grandis
Eucgr.A02654 0.5kb upstream 0.5kb upstream 500 false Chr01: 41838892-41839391 Eucalyptus grandis
Eucgr.A02654 0.5kb downstream 0.5kb downstream 4007 true Chr01: 41839392-41843398 Eucalyptus grandis
Eucgr.A02654 0.5kb downstream 0.5kb downstream 500 false Chr01: 41842899-41843398 Eucalyptus grandis
Eucgr.A02654 1.0kb upstream 1.0kb upstream 4507 true Chr01: 41838392-41842898 Eucalyptus grandis
Eucgr.A02654 1.0kb upstream 1.0kb upstream 1000 false Chr01: 41838392-41839391 Eucalyptus grandis
Eucgr.A02654 1.0kb downstream 1.0kb downstream 4507 true Chr01: 41839392-41843898 Eucalyptus grandis
Eucgr.A02654 1.0kb downstream 1.0kb downstream 1000 false Chr01: 41842899-41843898 Eucalyptus grandis
Eucgr.A02654 2.0kb upstream 2.0kb upstream 5507 true Chr01: 41837392-41842898 Eucalyptus grandis
Eucgr.A02654 2.0kb upstream 2.0kb upstream 2000 false Chr01: 41837392-41839391 Eucalyptus grandis
Eucgr.A02654 2.0kb downstream 2.0kb downstream 5507 true Chr01: 41839392-41844898 Eucalyptus grandis
Eucgr.A02654 2.0kb downstream 2.0kb downstream 2000 false Chr01: 41842899-41844898 Eucalyptus grandis
Eucgr.A02654 5.0kb upstream 5.0kb upstream 8507 true Chr01: 41834392-41842898 Eucalyptus grandis
Eucgr.A02654 5.0kb upstream 5.0kb upstream 5000 false Chr01: 41834392-41839391 Eucalyptus grandis
Eucgr.A02654 5.0kb downstream 5.0kb downstream 8507 true Chr01: 41839392-41847898 Eucalyptus grandis
Eucgr.A02654 5.0kb downstream 5.0kb downstream 5000 false Chr01: 41842899-41847898 Eucalyptus grandis
Eucgr.A02654 10.0kb upstream 10.0kb upstream 13507 true Chr01: 41829392-41842898 Eucalyptus grandis
Eucgr.A02654 10.0kb upstream 10.0kb upstream 10000 false Chr01: 41829392-41839391 Eucalyptus grandis
Eucgr.A02654 10.0kb downstream 10.0kb downstream 13507 true Chr01: 41839392-41852898 Eucalyptus grandis
Eucgr.A02654 10.0kb downstream 10.0kb downstream 10000 false Chr01: 41842899-41852898 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062449 5270 Rosid View MSA
123736560 5271 Pentapetalae View MSA
122793006 5272 Eudicot View MSA
122041832 5273 Angiosperm View MSA
123429078 5275 Viridiplantae View MSA
121344089 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.18221 0.0 12.252    
cufflinks 2.40544 0.0 7.75427    
cufflinks 1.94208 0.0 10.763   Low
cufflinks 4.07308 0.0 16.1958    
cufflinks 3.44983 0.0 10.5189    
cufflinks 5.37282 0.0 15.0694   High

0 Strain