Gene : Eucgr.A02629 E. grandis v2.0
Defline:  (1 of 1) PTHR14009:SF9 - LETM1-LIKE PROTEIN Genomic Order:  2357
Name:  ? Eucgr.A02629 Secondary Identifier:  ? PAC:32046971
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02629 0.5kb upstream 0.5kb upstream 14276 true Chr01: 41521097-41535372 Eucalyptus grandis
Eucgr.A02629 0.5kb upstream 0.5kb upstream 500 false Chr01: 41534873-41535372 Eucalyptus grandis
Eucgr.A02629 0.5kb downstream 0.5kb downstream 14276 true Chr01: 41520597-41534872 Eucalyptus grandis
Eucgr.A02629 0.5kb downstream 0.5kb downstream 500 false Chr01: 41520597-41521096 Eucalyptus grandis
Eucgr.A02629 1.0kb upstream 1.0kb upstream 14776 true Chr01: 41521097-41535872 Eucalyptus grandis
Eucgr.A02629 1.0kb upstream 1.0kb upstream 1000 false Chr01: 41534873-41535872 Eucalyptus grandis
Eucgr.A02629 1.0kb downstream 1.0kb downstream 14776 true Chr01: 41520097-41534872 Eucalyptus grandis
Eucgr.A02629 1.0kb downstream 1.0kb downstream 1000 false Chr01: 41520097-41521096 Eucalyptus grandis
Eucgr.A02629 2.0kb upstream 2.0kb upstream 15776 true Chr01: 41521097-41536872 Eucalyptus grandis
Eucgr.A02629 2.0kb upstream 2.0kb upstream 2000 false Chr01: 41534873-41536872 Eucalyptus grandis
Eucgr.A02629 2.0kb downstream 2.0kb downstream 15776 true Chr01: 41519097-41534872 Eucalyptus grandis
Eucgr.A02629 2.0kb downstream 2.0kb downstream 2000 false Chr01: 41519097-41521096 Eucalyptus grandis
Eucgr.A02629 5.0kb upstream 5.0kb upstream 18776 true Chr01: 41521097-41539872 Eucalyptus grandis
Eucgr.A02629 5.0kb upstream 5.0kb upstream 5000 false Chr01: 41534873-41539872 Eucalyptus grandis
Eucgr.A02629 5.0kb downstream 5.0kb downstream 18776 true Chr01: 41516097-41534872 Eucalyptus grandis
Eucgr.A02629 5.0kb downstream 5.0kb downstream 5000 false Chr01: 41516097-41521096 Eucalyptus grandis
Eucgr.A02629 10.0kb upstream 10.0kb upstream 23776 true Chr01: 41521097-41544872 Eucalyptus grandis
Eucgr.A02629 10.0kb upstream 10.0kb upstream 10000 false Chr01: 41534873-41544872 Eucalyptus grandis
Eucgr.A02629 10.0kb downstream 10.0kb downstream 23776 true Chr01: 41511097-41534872 Eucalyptus grandis
Eucgr.A02629 10.0kb downstream 10.0kb downstream 10000 false Chr01: 41511097-41521096 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063652 5270 Rosid View MSA
123740190 5271 Pentapetalae View MSA
122788808 5272 Eudicot View MSA
122047969 5273 Angiosperm View MSA
121348078 5274 Embryophyte View MSA
123380722 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.66592 0.0 21.7332    
cufflinks 4.90297 0.0 11.4366    
cufflinks 6.32164 0.0 15.8235    
cufflinks 3.32973 0.0 9.76776   Low
cufflinks 3.78176 0.0 10.0781    
cufflinks 13.8409 0.0 31.4984   High

0 Strain