Gene : Eucgr.A02646 E. grandis v2.0
Defline:  (1 of 6) PTHR10209//PTHR10209:SF148 - OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN Genomic Order:  2373
Name:  ? Eucgr.A02646 Secondary Identifier:  ? PAC:32049118
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02646 0.5kb upstream 0.5kb upstream 1974 true Chr01: 41777640-41779613 Eucalyptus grandis
Eucgr.A02646 0.5kb upstream 0.5kb upstream 500 false Chr01: 41779114-41779613 Eucalyptus grandis
Eucgr.A02646 0.5kb downstream 0.5kb downstream 1974 true Chr01: 41777140-41779113 Eucalyptus grandis
Eucgr.A02646 0.5kb downstream 0.5kb downstream 500 false Chr01: 41777140-41777639 Eucalyptus grandis
Eucgr.A02646 1.0kb upstream 1.0kb upstream 2474 true Chr01: 41777640-41780113 Eucalyptus grandis
Eucgr.A02646 1.0kb upstream 1.0kb upstream 1000 false Chr01: 41779114-41780113 Eucalyptus grandis
Eucgr.A02646 1.0kb downstream 1.0kb downstream 2474 true Chr01: 41776640-41779113 Eucalyptus grandis
Eucgr.A02646 1.0kb downstream 1.0kb downstream 1000 false Chr01: 41776640-41777639 Eucalyptus grandis
Eucgr.A02646 2.0kb upstream 2.0kb upstream 3474 true Chr01: 41777640-41781113 Eucalyptus grandis
Eucgr.A02646 2.0kb upstream 2.0kb upstream 2000 false Chr01: 41779114-41781113 Eucalyptus grandis
Eucgr.A02646 2.0kb downstream 2.0kb downstream 3474 true Chr01: 41775640-41779113 Eucalyptus grandis
Eucgr.A02646 2.0kb downstream 2.0kb downstream 2000 false Chr01: 41775640-41777639 Eucalyptus grandis
Eucgr.A02646 5.0kb upstream 5.0kb upstream 6474 true Chr01: 41777640-41784113 Eucalyptus grandis
Eucgr.A02646 5.0kb upstream 5.0kb upstream 5000 false Chr01: 41779114-41784113 Eucalyptus grandis
Eucgr.A02646 5.0kb downstream 5.0kb downstream 6474 true Chr01: 41772640-41779113 Eucalyptus grandis
Eucgr.A02646 5.0kb downstream 5.0kb downstream 5000 false Chr01: 41772640-41777639 Eucalyptus grandis
Eucgr.A02646 10.0kb upstream 10.0kb upstream 11474 true Chr01: 41777640-41789113 Eucalyptus grandis
Eucgr.A02646 10.0kb upstream 10.0kb upstream 10000 false Chr01: 41779114-41789113 Eucalyptus grandis
Eucgr.A02646 10.0kb downstream 10.0kb downstream 11474 true Chr01: 41767640-41779113 Eucalyptus grandis
Eucgr.A02646 10.0kb downstream 10.0kb downstream 10000 false Chr01: 41767640-41777639 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071640 5270 Rosid View MSA
123753505 5271 Pentapetalae View MSA
122796711 5272 Eudicot View MSA
122051611 5273 Angiosperm View MSA
123429101 5275 Viridiplantae View MSA
121351374 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.199367 0.0 0.720377 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0178217 0.0 0.152922 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.13328 0.0 8.15094   High

0 Strain