Gene : Eucgr.A02640 E. grandis v2.0
Defline:  (1 of 1) PTHR10555:SF122 - SORTING NEXIN 1 Genomic Order:  2368
Name:  ? Eucgr.A02640 Secondary Identifier:  ? PAC:32047108
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02640 0.5kb upstream 0.5kb upstream 6732 true Chr01: 41694637-41701368 Eucalyptus grandis
Eucgr.A02640 0.5kb upstream 0.5kb upstream 500 false Chr01: 41694637-41695136 Eucalyptus grandis
Eucgr.A02640 0.5kb downstream 0.5kb downstream 6732 true Chr01: 41695137-41701868 Eucalyptus grandis
Eucgr.A02640 0.5kb downstream 0.5kb downstream 500 false Chr01: 41701369-41701868 Eucalyptus grandis
Eucgr.A02640 1.0kb upstream 1.0kb upstream 7232 true Chr01: 41694137-41701368 Eucalyptus grandis
Eucgr.A02640 1.0kb upstream 1.0kb upstream 1000 false Chr01: 41694137-41695136 Eucalyptus grandis
Eucgr.A02640 1.0kb downstream 1.0kb downstream 7232 true Chr01: 41695137-41702368 Eucalyptus grandis
Eucgr.A02640 1.0kb downstream 1.0kb downstream 1000 false Chr01: 41701369-41702368 Eucalyptus grandis
Eucgr.A02640 2.0kb upstream 2.0kb upstream 8232 true Chr01: 41693137-41701368 Eucalyptus grandis
Eucgr.A02640 2.0kb upstream 2.0kb upstream 2000 false Chr01: 41693137-41695136 Eucalyptus grandis
Eucgr.A02640 2.0kb downstream 2.0kb downstream 8232 true Chr01: 41695137-41703368 Eucalyptus grandis
Eucgr.A02640 2.0kb downstream 2.0kb downstream 2000 false Chr01: 41701369-41703368 Eucalyptus grandis
Eucgr.A02640 5.0kb upstream 5.0kb upstream 11232 true Chr01: 41690137-41701368 Eucalyptus grandis
Eucgr.A02640 5.0kb upstream 5.0kb upstream 5000 false Chr01: 41690137-41695136 Eucalyptus grandis
Eucgr.A02640 5.0kb downstream 5.0kb downstream 11232 true Chr01: 41695137-41706368 Eucalyptus grandis
Eucgr.A02640 5.0kb downstream 5.0kb downstream 5000 false Chr01: 41701369-41706368 Eucalyptus grandis
Eucgr.A02640 10.0kb upstream 10.0kb upstream 16232 true Chr01: 41685137-41701368 Eucalyptus grandis
Eucgr.A02640 10.0kb upstream 10.0kb upstream 10000 false Chr01: 41685137-41695136 Eucalyptus grandis
Eucgr.A02640 10.0kb downstream 10.0kb downstream 16232 true Chr01: 41695137-41711368 Eucalyptus grandis
Eucgr.A02640 10.0kb downstream 10.0kb downstream 10000 false Chr01: 41701369-41711368 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066249 5270 Rosid View MSA
123741756 5271 Pentapetalae View MSA
122792565 5272 Eudicot View MSA
122045293 5273 Angiosperm View MSA
121345603 5274 Embryophyte View MSA
123428162 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.622 0.0 30.4514   Low
cufflinks 28.4905 0.0 63.0712    
cufflinks 15.8517 0.0 35.24    
cufflinks 44.9165 0.0 100.649 High High
cufflinks 22.9551 0.0 50.7666    
cufflinks 17.3517 0.0 38.5516    

0 Strain