Gene : Eucgr.A02609 E. grandis v2.0
Defline:  (1 of 1) PTHR33057:SF33 - EXPRESSED PROTEIN-RELATED Genomic Order:  2339
Name:  ? Eucgr.A02609 Secondary Identifier:  ? PAC:32048040
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02609 0.5kb upstream 0.5kb upstream 1558 true Chr01: 41282833-41284390 Eucalyptus grandis
Eucgr.A02609 0.5kb upstream 0.5kb upstream 500 false Chr01: 41283891-41284390 Eucalyptus grandis
Eucgr.A02609 0.5kb downstream 0.5kb downstream 1558 true Chr01: 41282333-41283890 Eucalyptus grandis
Eucgr.A02609 0.5kb downstream 0.5kb downstream 500 false Chr01: 41282333-41282832 Eucalyptus grandis
Eucgr.A02609 1.0kb upstream 1.0kb upstream 2058 true Chr01: 41282833-41284890 Eucalyptus grandis
Eucgr.A02609 1.0kb upstream 1.0kb upstream 1000 false Chr01: 41283891-41284890 Eucalyptus grandis
Eucgr.A02609 1.0kb downstream 1.0kb downstream 2058 true Chr01: 41281833-41283890 Eucalyptus grandis
Eucgr.A02609 1.0kb downstream 1.0kb downstream 1000 false Chr01: 41281833-41282832 Eucalyptus grandis
Eucgr.A02609 2.0kb upstream 2.0kb upstream 3058 true Chr01: 41282833-41285890 Eucalyptus grandis
Eucgr.A02609 2.0kb upstream 2.0kb upstream 2000 false Chr01: 41283891-41285890 Eucalyptus grandis
Eucgr.A02609 2.0kb downstream 2.0kb downstream 3058 true Chr01: 41280833-41283890 Eucalyptus grandis
Eucgr.A02609 2.0kb downstream 2.0kb downstream 2000 false Chr01: 41280833-41282832 Eucalyptus grandis
Eucgr.A02609 5.0kb upstream 5.0kb upstream 6058 true Chr01: 41282833-41288890 Eucalyptus grandis
Eucgr.A02609 5.0kb upstream 5.0kb upstream 5000 false Chr01: 41283891-41288890 Eucalyptus grandis
Eucgr.A02609 5.0kb downstream 5.0kb downstream 6058 true Chr01: 41277833-41283890 Eucalyptus grandis
Eucgr.A02609 5.0kb downstream 5.0kb downstream 5000 false Chr01: 41277833-41282832 Eucalyptus grandis
Eucgr.A02609 10.0kb upstream 10.0kb upstream 11058 true Chr01: 41282833-41293890 Eucalyptus grandis
Eucgr.A02609 10.0kb upstream 10.0kb upstream 10000 false Chr01: 41283891-41293890 Eucalyptus grandis
Eucgr.A02609 10.0kb downstream 10.0kb downstream 11058 true Chr01: 41272833-41283890 Eucalyptus grandis
Eucgr.A02609 10.0kb downstream 10.0kb downstream 10000 false Chr01: 41272833-41282832 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071458 5270 Rosid View MSA
123749654 5271 Pentapetalae View MSA
122787439 5272 Eudicot View MSA
122050214 5273 Angiosperm View MSA
121311801 5274 Embryophyte View MSA
123349046 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.64234 0.0 17.2473   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.03654 0.0 6.05271    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.701596 0.0 2.37516 Low Low
cufflinks 3.25451 0.0 8.94238    

0 Strain