Gene : Eucgr.A02599 E. grandis v2.0
Defline:  (1 of 1) PTHR11638//PTHR11638:SF69 - ATP-DEPENDENT CLP PROTEASE Genomic Order:  2330
Name:  ? Eucgr.A02599 Secondary Identifier:  ? PAC:32046033
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02599 0.5kb upstream 0.5kb upstream 4174 true Chr01: 41172403-41176576 Eucalyptus grandis
Eucgr.A02599 0.5kb upstream 0.5kb upstream 500 false Chr01: 41172403-41172902 Eucalyptus grandis
Eucgr.A02599 0.5kb downstream 0.5kb downstream 4174 true Chr01: 41172903-41177076 Eucalyptus grandis
Eucgr.A02599 0.5kb downstream 0.5kb downstream 500 false Chr01: 41176577-41177076 Eucalyptus grandis
Eucgr.A02599 1.0kb upstream 1.0kb upstream 4674 true Chr01: 41171903-41176576 Eucalyptus grandis
Eucgr.A02599 1.0kb upstream 1.0kb upstream 1000 false Chr01: 41171903-41172902 Eucalyptus grandis
Eucgr.A02599 1.0kb downstream 1.0kb downstream 4674 true Chr01: 41172903-41177576 Eucalyptus grandis
Eucgr.A02599 1.0kb downstream 1.0kb downstream 1000 false Chr01: 41176577-41177576 Eucalyptus grandis
Eucgr.A02599 2.0kb upstream 2.0kb upstream 5674 true Chr01: 41170903-41176576 Eucalyptus grandis
Eucgr.A02599 2.0kb upstream 2.0kb upstream 2000 false Chr01: 41170903-41172902 Eucalyptus grandis
Eucgr.A02599 2.0kb downstream 2.0kb downstream 5674 true Chr01: 41172903-41178576 Eucalyptus grandis
Eucgr.A02599 2.0kb downstream 2.0kb downstream 2000 false Chr01: 41176577-41178576 Eucalyptus grandis
Eucgr.A02599 5.0kb upstream 5.0kb upstream 8674 true Chr01: 41167903-41176576 Eucalyptus grandis
Eucgr.A02599 5.0kb upstream 5.0kb upstream 5000 false Chr01: 41167903-41172902 Eucalyptus grandis
Eucgr.A02599 5.0kb downstream 5.0kb downstream 8674 true Chr01: 41172903-41181576 Eucalyptus grandis
Eucgr.A02599 5.0kb downstream 5.0kb downstream 5000 false Chr01: 41176577-41181576 Eucalyptus grandis
Eucgr.A02599 10.0kb upstream 10.0kb upstream 13674 true Chr01: 41162903-41176576 Eucalyptus grandis
Eucgr.A02599 10.0kb upstream 10.0kb upstream 10000 false Chr01: 41162903-41172902 Eucalyptus grandis
Eucgr.A02599 10.0kb downstream 10.0kb downstream 13674 true Chr01: 41172903-41186576 Eucalyptus grandis
Eucgr.A02599 10.0kb downstream 10.0kb downstream 10000 false Chr01: 41176577-41186576 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070007 5270 Rosid View MSA
123743418 5271 Pentapetalae View MSA
122787302 5272 Eudicot View MSA
122049419 5273 Angiosperm View MSA
121351273 5274 Embryophyte View MSA
123382090 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.636378 0.0 1.80597    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.608131 0.0 1.72924    
cufflinks 0.190492 0.0 0.61955 Low Low
cufflinks 1.14212 0.0 3.04435   High
cufflinks 0.449576 0.0 1.32921 Low  

0 Strain