Gene : Eucgr.A02562 E. grandis v2.0
Defline:  (1 of 2) PTHR31182:SF2 - F26K24.5 PROTEIN Genomic Order:  2295
Name:  ? Eucgr.A02562 Secondary Identifier:  ? PAC:32047189
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02562 0.5kb upstream 0.5kb upstream 4470 true Chr01: 40811472-40815941 Eucalyptus grandis
Eucgr.A02562 0.5kb upstream 0.5kb upstream 500 false Chr01: 40811472-40811971 Eucalyptus grandis
Eucgr.A02562 0.5kb downstream 0.5kb downstream 4470 true Chr01: 40811972-40816441 Eucalyptus grandis
Eucgr.A02562 0.5kb downstream 0.5kb downstream 500 false Chr01: 40815942-40816441 Eucalyptus grandis
Eucgr.A02562 1.0kb upstream 1.0kb upstream 4970 true Chr01: 40810972-40815941 Eucalyptus grandis
Eucgr.A02562 1.0kb upstream 1.0kb upstream 1000 false Chr01: 40810972-40811971 Eucalyptus grandis
Eucgr.A02562 1.0kb downstream 1.0kb downstream 4970 true Chr01: 40811972-40816941 Eucalyptus grandis
Eucgr.A02562 1.0kb downstream 1.0kb downstream 1000 false Chr01: 40815942-40816941 Eucalyptus grandis
Eucgr.A02562 2.0kb upstream 2.0kb upstream 5970 true Chr01: 40809972-40815941 Eucalyptus grandis
Eucgr.A02562 2.0kb upstream 2.0kb upstream 2000 false Chr01: 40809972-40811971 Eucalyptus grandis
Eucgr.A02562 2.0kb downstream 2.0kb downstream 5970 true Chr01: 40811972-40817941 Eucalyptus grandis
Eucgr.A02562 2.0kb downstream 2.0kb downstream 2000 false Chr01: 40815942-40817941 Eucalyptus grandis
Eucgr.A02562 5.0kb upstream 5.0kb upstream 8970 true Chr01: 40806972-40815941 Eucalyptus grandis
Eucgr.A02562 5.0kb upstream 5.0kb upstream 5000 false Chr01: 40806972-40811971 Eucalyptus grandis
Eucgr.A02562 5.0kb downstream 5.0kb downstream 8970 true Chr01: 40811972-40820941 Eucalyptus grandis
Eucgr.A02562 5.0kb downstream 5.0kb downstream 5000 false Chr01: 40815942-40820941 Eucalyptus grandis
Eucgr.A02562 10.0kb upstream 10.0kb upstream 13970 true Chr01: 40801972-40815941 Eucalyptus grandis
Eucgr.A02562 10.0kb upstream 10.0kb upstream 10000 false Chr01: 40801972-40811971 Eucalyptus grandis
Eucgr.A02562 10.0kb downstream 10.0kb downstream 13970 true Chr01: 40811972-40825941 Eucalyptus grandis
Eucgr.A02562 10.0kb downstream 10.0kb downstream 10000 false Chr01: 40815942-40825941 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062767 5270 Rosid View MSA
123743852 5271 Pentapetalae View MSA
122788882 5272 Eudicot View MSA
122044356 5273 Angiosperm View MSA
121348357 5274 Embryophyte View MSA
123380828 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.7486 0.0 34.8348    
cufflinks 13.3 0.0 29.463    
cufflinks 15.9058 0.0 35.1803    
cufflinks 21.2544 0.0 47.0872   High
cufflinks 16.1707 0.0 35.7646    
cufflinks 6.46532 0.0 14.7429   Low

0 Strain